KEGG   Mus musculus (house mouse): 56187
Entry
56187             CDS       T01002                                 
Symbol
Rabggta, gm
Name
(RefSeq) Rab geranylgeranyl transferase, a subunit
  KO
K14050  geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:mmu01006]
    56187 (Rabggta)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    56187 (Rabggta)
Enzymes [BR:mmu01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     56187 (Rabggta)
Prenyltransferases [BR:mmu01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   56187 (Rabggta)
Membrane trafficking [BR:mmu04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    56187 (Rabggta)
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    56187 (Rabggta)
SSDB
Motif
Pfam: RabGGT_insert PPTA LRR_4 LRR_9 LRR_8 LRR_1
Other DBs
NCBI-GeneID: 56187
NCBI-ProteinID: NP_062392
MGI: 1860443
Ensembl: ENSMUSG00000040472
UniProt: Q9JHK4
Position
14:complement(55953321..55959720)
AA seq 567 aa
MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKREAGELDESVLELTSQILGANP
DFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRL
PEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSS
WHYRSCLLPQLHPQPDSGPQGRLPENVLLRELELVQNAFFTDPNDQSAWFYHRWLLGRAE
PHDVLCCLHVSREEACLSVCFSRPLIVGSKMGTLLLTVDEAPLSVEWRTPDGRNRPSHVW
LCDLPAASLNDHLPQHTFRVIWTGSDTQKECVLLKGHQECWCRDSATDEQLFRCELSVEK
STVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLEYFSTLKAVDPMRAA
YLDDLRSKFLVENSVLKMEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPP
ALAALRCLEVLQASDNVLENLDGVANLPRLRELLLCNNRLQQSAALQTLASCPRLVFLNL
QGNSLCQEEGIRERLAEMLPSVSSILT
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgcatgggcgcctgaaggtgaagacgtccgaagagcaggcagaggccaaaaggctagag
cgggaacagaagctaaagctctaccagtcagccactcaagctgtcttccagaagcgggag
gcaggcgagctggatgaatccgtcctagaactgacaagccagattctgggagccaaccct
gattttgccaccctctggaactgtcgcagagaagtgctccagcagctagaaacccagaag
tcccctgaggagttggctgctcttgtgaaggcagaactaggcttccttgagagctgtctg
cgtgtgaaccctaagtcctatggcacttggcaccaccgctgctggctgctgagtcgcctg
cctgagcccaactgggcccgggagctggagctgtgcgctcgcttcctcgaggccgatgag
cggaactttcattgctgggactatcggcgatttgtagctgcacaggctgctgtcgcgcct
gcagaggaactagccttcactgacagcctcatcacccggaacttctccaactattcttcc
tggcattatcgctcctgcctcttgccccagctgcacccccagccagactctggcccccag
ggacggctccctgaaaatgtactgctgagagagctggagttggtgcagaatgccttcttt
actgaccccaatgatcagagtgcctggttctatcaccgctggctcctggggcgggcggag
ccccacgatgttctgtgctgcctgcatgtgagccgggaagaggcctgtctgtcagtctgc
ttttctcgtcccctgatagtgggctccaagatggggaccttgctactcacggttgacgag
gcacctttgagtgtggaatggaggactccagatggcaggaaccggcccagccatgtctgg
ctctgtgacctgcctgctgcctctctcaatgaccacttgccccagcacacgtttcgtgtc
atctggacaggaagcgatacccagaaggagtgtgtgcttttaaaaggtcaccaggagtgc
tggtgccgagactcagccactgatgaacagttgttcaggtgtgagctgtccgtggagaag
tccacagtgctacagtccgagcttgagtcctgtaaggagctgcaggaactggagcctgag
aataaatggtgcctgctgaccatcatcctcctgatgagggcactggaccccctcctctac
gagaaagaaacactggagtacttcagtaccctcaaagctgtggacccgatgagagcagcc
tacttggacgacctgcgcagcaagttcttggtggaaaacagtgttctcaagatggagtat
gctgacgtgcgtgtgctgcacctggctcacaaggatctcacagtgctctgccatttggaa
caactgctcttggtcactcatcttgacctgtcccataatcgtctccgagccttgccccca
gccctggctgctctgcgctgtctcgaggtgttgcaggccagtgataatgtcctggagaac
ttggacggcgtggctaaccttccccggctgcgggagctgttactatgtaataaccgcctc
cagcagtctgctgcacttcagactcttgcctcctgccccaggctagtcttcctcaacctg
cagggcaactcgctgtgccaagaagagggcatccgggagcgtttggctgagatgctaccg
tccgtcagcagcatcctcacctag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (32)   
   RefSeq(nuc) (4)   
   GenBank (14)   
   EMBL (14)   
Protein domain (6)   
   Pfam (6)   
All databases (76)   

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