KEGG   Mus musculus (house mouse): 56200
Entry
56200             CDS       T01002                                 
Symbol
Ddx21, D10Ertd645e, D10Wsu42e
Name
(RefSeq) DExD box helicase 21
  KO
K16911  ATP-dependent RNA helicase DDX21 [EC:3.6.4.13]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mmu03009]
    56200 (Ddx21)
   03036 Chromosome and associated proteins [BR:mmu03036]
    56200 (Ddx21)
Ribosome biogenesis [BR:mmu03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    56200 (Ddx21)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    56200 (Ddx21)
SSDB
Motif
Pfam: DEAD Helicase_C GUCT ResIII CMS1 AAA_30 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 56200
NCBI-ProteinID: NP_062426
MGI: 1860494
Ensembl: ENSMUSG00000020075
UniProt: Q9JIK5 Q6PCP0
Structure
Position
10:complement(62416026..62438077)
AA seq 851 aa
MPGKLRSGAKLGSDGAEESMETLPKPSEKKTRKEKTKSKTEEATEGMEEAVSSKAKKTNK
KGPSEDDVDPPKSRKAKKQEEEPQDDTASTSKTSKKKKEPLEKQADSETKEIITEEPSEE
EADMPKPKKMKKGKEANGDAGEKSPKLKNGLSQPSEEEADIPKPKKMKKGKEANGDAGEK
SPKLKNGLSQPSEEEVDIPKPKKMKKGKEASGDAGEKSPRLKDGLSQPSEPKSNSSDAPG
EESSSETEKEIPVEQKEGAFSNFPISEETVKLLKARGVNFLFPIQAKTFHHVYSGKDLIA
QARTGTGKTFSFAIPLIEKLQGGLQERKRGRAPQVLVLAPTRELANQVSKDFSDITKKLS
VACFYGGTPYGGQIERMRSGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMG
FADQVEEILCVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAA
ITVEHLAIKCHWTERAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTCIKQDAQSLH
GDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRT
GRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPP
TAISHFKQSAEKLIEEKGAVEALAAALAHISGATSVDQRSLINSQAGFVTMILRCSIEMP
NISYAWKELKEQLGESIDAKVKGMVFLKGKLGVCFDVRTEAVTEIQEKWHDSRRWQLTVA
TEQPELEGPPDGYRGRMGQRDGSRGAFRGQRGGSRNFRGQGQRGGSRNFRGQRPGGGNRG
QKRSFSKAFGQ
NT seq 2556 nt   +upstreamnt  +downstreamnt
atgccgggaaaactccgcagtggggccaagttgggctcagacggggccgaggagagcatg
gagacgctgccgaagccaagcgagaagaaaactagaaaagagaagacaaaatcaaagacc
gaagaagcaacagaaggaatggaagaggccgtttcctccaaagcaaagaaaacaaacaag
aaagggccttctgaggatgatgtggatccccctaaatccaggaaggccaagaagcaggag
gaggagcctcaagacgacactgcttctacaagcaaaacctccaagaagaaaaaggagccc
cttgagaagcaagcagactctgaaaccaaagagataataacagaggagccttccgaagaa
gaggcagacatgcctaagcccaagaagatgaagaaagggaaagaagcaaacggagatgcc
ggagagaaaagccccaagctgaagaatggactctcccaaccttccgaagaagaggcagac
attcctaagcccaagaagatgaagaaagggaaagaagcaaacggagatgctggagagaaa
agccccaagctgaagaatggactctcccaaccttccgaagaagaggtagacattcctaag
cccaagaagatgaagaaagggaaagaagcaagcggagatgcgggagagaaaagccccagg
ctgaaggatggactctcccaaccttctgaaccgaaatccaactccagtgatgctcctggt
gaggaaagtagtagcgagacagaaaaggaaatacctgtggagcagaaagagggagctttc
tctaattttcccatttctgaagagactgtcaagcttctcaaagctcgtggggtgaacttc
ctgtttcctatacaagccaagacctttcatcatgtgtacagtgggaaagacttaattgcc
caggcacggacaggaaccggaaagacattctcttttgccatccctttaattgagaaactt
caaggtgggctacaagagaggaagagaggccgagcccctcaggtgctagtccttgcaccc
acaagagaattagcaaatcaagtgagcaaagacttcagcgacatcaccaaaaagctctct
gtagcttgtttttatggtggaacaccctacggtggtcagattgaacgaatgcggagtggg
attgatatcctggttgggaccccaggtcgtattaaagaccacttgcagaatggcaagcta
gatctcaccaaacttaaacatgttgtcctggatgaagtcgaccagatgttggatatgggt
tttgctgatcaagtggaagaaattttatgtgttgcatacaagaaagattctgaagacaac
ccccaaacattgcttttctctgcaacttgccctcattgggtgtttaatgttgctaagaaa
tacatgaaatctacatacgaacaggtggacctgattggtaaaaagactcagaaagcagct
ataactgtggagcacctggcgattaagtgtcactggacagaaagggcagcggtgattggg
gatgtgatccgagtgtacagtggtcatcaagggcgcacgatcatcttctgtgaaaccaag
aaggatgcccaggagctatctcagaacacgtgcataaagcaggatgcccagtccttacat
ggcgacattccacagaagcaaagggaaatcaccctgaaaggtttccgaaatggcaatttt
ggagttttggtggcaaccaatgttgctgcccgtgggttagacatccctgaggttgacttg
gttgttcagagctgcccaccaaaggatgtggagtcttacattcatcgttcggggcggaca
ggcagagctggaaggacaggagtttgcatctgcttttaccagaacaaagaagagtaccag
ttagcacaagtggagcagaaagcgggaattaaatttaaacggataggtgttccttctgca
acggaaataataaaagcctccagcaaagacgccatcaggctcttggattctgtgcctccc
actgccattagccatttcaagcagtcagctgagaagctgattgaggagaagggagctgta
gaggccttggcagctgctctggcccacatctcaggagccacatcagtcgatcagcgctcc
ctgatcaactcgcaagcaggctttgtgaccatgatcctgcggtgctccattgagatgccc
aacatcagttacgcttggaaagaacttaaggagcagctgggcgagagcatcgatgccaaa
gtgaagggaatggtcttcctcaaaggaaaactgggggtttgttttgatgtccgaactgaa
gcagtcacagaaatacaggagaagtggcatgattcgagacgctggcagctcaccgtggcc
accgagcagccagagctggagggacctccagacggatatcgaggccgcatgggtcagcgt
gatggcagccgtggtgctttcagaggacagcggggtggaagcaggaacttccggggacag
ggacagcgaggaggaagtagaaacttccgaggacagcgaccaggaggtggcaacagaggc
cagaagcggagttttagtaaagcgtttggtcagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (22)   
   RefSeq(nuc) (2)   
   GenBank (10)   
   EMBL (10)   
3D Structure (1)   
   PDB (1)   
Protein domain (7)   
   Pfam (7)   
All databases (76)   

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