KEGG   Mus musculus (house mouse): 56430
Entry
56430             CDS       T01002                                 
Symbol
Clip1, 1110007I12Rik, 4631429H07Rik, CLIP-170, CLIP170, CYLN1, Clip50, Rsn, mKIAA4046, restin
Name
(RefSeq) CAP-GLY domain containing linker protein 1
  KO
K10421  CAP-Gly domain-containing linker protein 1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    56430 (Clip1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    56430 (Clip1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mmu04812]
    56430 (Clip1)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     56430 (Clip1)
Cytoskeleton proteins [BR:mmu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     56430 (Clip1)
SSDB
Motif
Pfam: CAP_GLY CLIP1_ZNF Fungal_TACC bZIP_1
Other DBs
NCBI-GeneID: 56430
NCBI-ProteinID: NP_062739
MGI: 1928401
Ensembl: ENSMUSG00000049550
UniProt: Q922J3
Structure
Position
5:complement(123715857..123822527)
AA seq 1391 aa
MSMLKPSGLKAPTKILKPGSTALKTPAAAAAPVEKTIPSEKASGPPSSETQEEFVDDFRV
GERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTR
PSKLTRKVQAEDEANGLQAAPGRTASPLSTAAATMVSSSPATPSNIPHKPSQSTAKEPSA
TPQISNLTKTASESISNLSEAGSVKKGERELKVGDRVLVGGTKAGVVRFLGETDFAKGEW
CGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVMA
ATPASLKRSPSASSLSSMSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEKQ
QHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAAD
REKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEVATVSEKSRIMELEKDLALRAQEVA
ELRRRLESSKPPGDVDMSLSLLQEISALQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKE
IKALHTATEKLSKENESLRSKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSK
GIGTDSAEFAELKTQIERLRLDYQHEIESLQSKQDSERSAHAKEMETMQAKLMKIIKEKE
DSLEAVKARLDSAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKYTEQSEVIGNFTSQLS
AVKEKLLDLDALRKANSEGKLELETLRQQLEGAEKQIKNLETERNAESSKANSITKELQE
KELVLTGLQDSLNQVNQVKETLEKELQTLKEKFASTSEEAVSAQTRMQDTVNKLHQKEEQ
FNVLSSELEKLRENLTDMEAKFKEKDDREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKM
NDELRLKERSVEELQLKLTKANENASFLQKSIGEVTLKAEQSQQQAARKHEEEKKELEEK
LLELEKKMETSYNQCQDLKAKYEKASSETKTKHEEILQNLQKMLADTEDKLKAAQEANRD
LMQDMEELKTQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNARLQNELDTLK
ENNLKTVEELNKSKELLSVENQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELG
RTRDEVTSHQKLEEERSVLNNQLLEMKKRESEFRKDADEEKASLQKSISLTSALLTEKDA
ELEKLRNEVTVLRGENATAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGN
TDAQAEEDERAQESQIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGEDLNSYDSDDQ
EKQSKKKPRLFCDICDCFDLHDTEDCPTQAQMSEDPPHSTHHGSRSEERPYCEICEMFGH
WATNCNDDETF
NT seq 4176 nt   +upstreamnt  +downstreamnt
atgagtatgctaaaacccagcggcctgaaggcccctaccaagatccttaagccgggaagc
acagccttgaagacgcctgctgctgctgcagctccagtggagaagacaatacccagtgag
aaagcctcgggccctccatcctccgagacccaagaggagtttgtggatgactttcgagtt
ggagaacgtgtttgggtgaacgggaataagcccggatttatccagtttcttggggaaact
cagttcgcaccaggccagtgggctgggattgttttagatgaacccatagggaagaacgat
ggctctgtggcgggagtgcggtatttccagtgtgaacctttaaagggcatattcacccga
ccttcaaagctaacgaggaaggtgcaggcagaagatgaagccaacggcctgcaggcagct
cctgggagaactgcttcacctctgtccactgctgcagctaccatggtgtcttcttctcca
gccactccctcaaatattccccacaaaccgtcccagtcaacggcaaaagaaccttcggct
acacctcaaattagcaacctcacaaaaactgccagtgagtcgatctccaacctttcagag
gctggctctgtcaagaagggggagcgggagctcaaggtcggagacagggtgctggttggt
ggcactaaggctggcgtagtccgctttcttggcgagaccgactttgccaagggggagtgg
tgtggtgtggagttagacgagcctttggggaagaacgatggtgctgtggccggaacaagg
tattttcagtgtcaacccaaatatggattgttcgctcctgtccacaaagtgacaaagatt
ggcttcccgtctactaccccagccaaagccaaagccgccgctgtgaggcgagtgatggcc
gccacgcccgccagcctgaagcgaagcccttctgcctcctccctcagctccatgagctcc
gtggcctcctctgtgagcagcaaacccagccggacaggactattgactgaaacctcctcc
cgctacgcccgcaagatctcgggcaccactgccctccaggaggcgctgaaggagaagcag
cagcacattgagcagctgctggctgagcgggacctggagcgggccgaggtggccaaggct
accagccacgtgggggaaatagagcaggagctagccctggcccgagatgggcatgaccag
catgtcctggaactagaggccaagatggaccagctacggaccatggtggaagctgctgac
agggagaaagtggagctgctcaaccagctggaagaggagaagaggaaggttgaggacctt
cagttccgagttgaagaagaatcaattaccaaaggcgatcttgaggtggctaccgtctca
gaaaagtcccgaataatggaactagaaaaggacctagcattgagagcacaggaagtagct
gagctccgaagaaggctagagtccagtaaacctcctggggatgtggatatgtctctctcc
cttttgcaagaaataagtgctttgcaagaaaagctagaagccatccatactgaccaccag
ggcgagatgacttctttgaaggaacacttcggagctcgagaggaggcgtttcagaaggag
atcaaggctctgcacacggccactgagaagctttccaaagagaacgagtccctgagaagc
aagctcgaccacgctaataaggagaactccgatgtgatagctctatggaagtccaaactg
gagaccgccatagcatcccaccagcaggcaatggaggagctgaaggtgtcctttagcaaa
ggcattggaacggactccgctgaatttgctgagttaaagacacagatagagagactgaga
ctagattaccagcacgaaatagaaagtttacagagtaaacaggactctgagcggtctgct
catgctaaagagatggagaccatgcaggccaagctgatgaagatcattaaagagaaggag
gacagcctggaggccgtcaaagcgagactggacagtgcagaagaccagcacctagtggaa
atggaggacacgctaaacaaactgcaggaggcggagattaaggtaaaggagctagaggtt
ctgcaggccaagtacactgaacaaagcgaggtcattggtaattttacatcgcagctcagt
gctgtcaaagaaaagctcttggatcttgatgcgcttcggaaagccaattccgaaggtaaa
ctggagctcgagacacttagacagcagcttgagggagctgaaaagcagattaaaaactta
gagactgaaaggaacgctgaaagtagcaaggctaatagcattaccaaagagctccaggag
aaagagctagtgctcactggtctgcaggacagtttgaatcaagtcaatcaagtgaaggag
actttggagaaagaacttcagactttgaaagaaaagtttgccagtacttcagaggaggcg
gtctctgctcagacaaggatgcaagataccgtaaataaactgcaccaaaaggaggaacag
tttaacgtgttgtcgtctgaactggagaagttgagagaaaatttaacagacatggaggca
aaatttaaagagaaggatgatcgagaagatcagctggtaaaggcaaaggaaaaattagaa
aacgacattgcagaaataatgaagatgtcaggagataactcttctcagctgacaaagatg
aatgatgaattacgtctgaaggaaagatccgtggaagaactccagctcaagcttacaaag
gccaatgaaaacgccagttttctgcagaagagtattggcgaagtgactcttaaagctgag
cagagtcagcagcaagcagccagaaaacatgaagaagaaaagaaagagttggaggaaaaa
ctgttggaactggaaaagaagatggaaacaagctacaaccagtgtcaggacctgaaagct
aagtatgaaaaagccagttctgagactaaaacaaagcatgaagaaatcctgcagaacctc
cagaagatgctggcggacacagaggataagctgaaggctgctcaggaggcgaacagagat
ctgatgcaggacatggaggagctgaaaacacaggccgacaaagccaaagctgctcagact
gcagaagacgccatgcagatcatggaacagatgaccaaagagaaaacagaaacgctggcc
tccttggaggacaccaagcaaacaaatgcaagactacagaatgaattggacacacttaag
gaaaacaacttgaaaactgtggaagagctgaacaagtcaaaagaactgctgagtgtagag
aaccaaaaaatggaagaattcaagaaagaaatagaaaccctaaagcaggcagcagctcag
aagtcccagcagctttcagcactgcaggaagagaacgtcaaacttgccgaggagctgggg
agaacccgggacgaagtcacaagtcaccagaagctggaagaagaacgatctgtactcaat
aatcagttgttagaaatgaaaaagagagaatctgagttcagaaaagacgccgatgaagag
aaagcctccttgcagaagtcgatcagcctcaccagtgccttgctcacagagaaggacgcg
gagctggagaagctgaggaatgaggtcacagtgctcaggggagagaatgccaccgccaag
tccctgcactcagttgtgcagacactggagtctgataaggtgaagcttgagctcaaggtc
aaaaacttggaacttcaactcaaggagaacaagaggcagctcagcagctcctcaggtaac
actgatgctcaggcggaagaggatgagagagcccaggagagtcagattgatttcctcaac
tcggtaatagtggatcttcaaagaaagaaccaagacctcaagatgaaggtggagatgatg
tctgaagctgcactcaatggcaacggggaagacctgaacagttatgacagtgatgaccag
gaaaagcagtccaagaagaaaccccgcctcttctgtgacatctgtgactgctttgacctc
cacgatacagaggactgtcccacccaggcacagatgtcggaagatcctccccattccact
caccatggcagccggagcgaggagcggccatactgtgagatctgtgagatgtttgggcac
tgggcaaccaactgcaatgacgacgagaccttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (98)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (89)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (71)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (69)   
DNA sequence (93)   
   RefSeq(nuc) (69)   
   GenBank (12)   
   EMBL (12)   
3D Structure (1)   
   PDB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (272)   

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