KEGG   Mus musculus (house mouse): 636931
Entry
636931            CDS       T01002                                 
Symbol
Trim71, 2610206G21Rik, Gm1127, Lin41, lin-41, mLin41, mlin-41
Name
(RefSeq) tripartite motif-containing 71
  KO
K12035  tripartite motif-containing protein 71 [EC:2.3.2.27]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    636931 (Trim71)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    636931 (Trim71)
   04121 Ubiquitin system [BR:mmu04121]
    636931 (Trim71)
Enzymes [BR:mmu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     636931 (Trim71)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     636931 (Trim71)
Ubiquitin system [BR:mmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    636931 (Trim71)
SSDB
Motif
Pfam: NHL Filamin DUF5128 zf-B_box SGL zf-C3HC4 zf-RING_5 zf-RING_UBOX COG5_N
Other DBs
NCBI-GeneID: 636931
NCBI-ProteinID: NP_001035968
MGI: 2685973
Ensembl: ENSMUSG00000079259
UniProt: Q1PSW8
Position
9:complement(114340336..114393437)
AA seq 855 aa
MASFPETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSAGGGGPGAAARRLHVLPC
LHAFCRPCLEAHRLPAPGGAGPAEALKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLLD
AVVATAEEPPPKNGRAGGGPGGAGGHSNHRHHAHHPAQRAAAPAPQPPPGPAASPGSLLM
RRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIERGPPGPAAASAAQQ
LGLGPPFAGAPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICRECTLGRHGGHSFAY
LQDALQDSRALTIQLLADAQQGRQALQLSIEQAQTVAEQVEMKAKVVQSEVKAVTARHKK
ALEDRECELLWKVEKIRQVKAKSLFLQVEKLRQSLSKLESTISAVQQVLEEGRALDILLA
RDRMLAQVQELKTIRGLLQPQEDDRIMFTPPDQALYLALKSIGFVSSGAFAPLTKATGDG
IKRALQGKVASFTVMGYDHDGEPRHSGGDLMSVVVLGPDGNLFGAEVSDQQNGTYIVSYR
PQLEGEHLVSVTLYNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSEGDGEGKLCRPWGVS
VDKEGFIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIIVADKD
NHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVF
LNKYGFEGSLWKHFDSPRGVAFNNEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGSGNGQ
FLRPQGVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGAQGSGFGQMDRPSGIAVTPDG
LIVVVDFGNNRILIF
NT seq 2568 nt   +upstreamnt  +downstreamnt
atggcttcgttcccggagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tcgcccgcgccgctctcctccaactcgtccgcctcgtcgtcgtcctcgcagacttccacg
tcgtcggcgggcggcggcggccccggggcggcggcgcggcgtcttcacgtcttgccctgc
ctgcacgccttctgccggccgtgcctcgaggcgcaccggctgcccgctcccggaggcgcg
ggccccgccgaggcgctgaagctgcgctgccccgtatgtgaccagaaggtggtcctggcc
gaggcggcgggcatggacgcgctgccatcctccgccttcctgctcagcaacctgctggac
gccgtggtggccaccgccgaagagccgccgcccaagaacgggcgcgcgggcggcggcccc
gggggcgcgggcggccacagcaaccaccggcaccatgcgcaccacccggcccagcgcgcc
gccgctccagcgccgcagccgccgcccggcccggccgcctcccccgggtcgctgctgatg
cgccggccgcacggctgcagctcctgcgacgagggcaacgccgcctcgtcgcgctgcctc
gactgccaggaacacctgtgcgacaactgtgtccgcgcgcaccagcgcgtccgcctcacc
aaggaccattacatcgagcgcggccctccggggcctgcggccgcctccgcggcacagcag
ctggggctcgggccgcccttcgcgggcgcgcccttctccattctctcggtgttcccggag
cgcctcggcttctgccagcaccacgacgatgaggtcctgcatctctactgtgacacctgc
tctgtccccatctgcagagagtgcacgctgggccgccacggtggccacagcttcgcctac
ctccaggatgccctgcaggactctcgggcactcaccatccagctgctggctgatgcccag
cagggccgccaggctctccagctgagcatcgagcaggcccagactgtggcagaacaggtg
gagatgaaggcgaaggtggtccagtctgaggtcaaggccgtcacagctcgccacaagaag
gccctggaggatcgggagtgtgagctgttgtggaaggtggagaagatccggcaggtgaag
gcgaagtctctgttcctgcaggtggagaagctgcggcagagtctcagcaagctggagagc
accatcagcgccgtgcagcaggtcctggaagagggccgcgccctggacatcctgctggcc
cgagaccggatgctggcccaggtgcaggagctcaagaccatccgaggcctcctgcagccc
caagaagatgaccgcattatgttcacgccccctgaccaggccctgtacctcgccctcaag
tctattggctttgtcagcagcggggccttcgccccgctcacgaaggctacaggagatggc
atcaagcgtgcccttcaggggaaggtggcctctttcactgtcatgggctacgaccacgat
ggtgagccccgccattcgggaggtgacctgatgtcagttgtggtcctcggccccgacgga
aacctgtttggtgcagaagtgagcgaccagcagaatggtacttacatagtgagctacagg
ccccagcttgagggtgagcacttggtgtcggtgacattgtacaatcagcatatagagaac
agccccttcaaggtcgtggtcaagtcgggccgcagctacgtgggcatcgggctccccggg
ctgagcttcggcagtgaaggtgacggggagggcaagctctgcaggccctggggcgtgagt
gttgataaggagggtttcatcatagtggctgaccgaagcaataacagaatccaggtgttt
aagccctgtggttccttccaccacaagtttggtacccttgggtctcgtcctgggcagttt
gaccgaccggctggggtggcttgtgacgcctcccgcaggatcatagtggccgacaaagac
aatcatcgcattcagatcttcaccttcgagggccagttccttcttaagtttggtgagaaa
ggcaccaagaacgggcagtttaactacccgtgggatgtagcagtgaattctgagggcaag
atcctcgtttcagacacccggaatcatcgcatccagttgttcggaccggacggggtcttc
ctgaacaagtacggcttcgagggatctctctggaagcacttcgactctccacggggcgtg
gctttcaacaatgaaggtcacctggtagtcaccgacttcaacaaccaccggcttctggtt
attcaccctgattgccaatctgcccgcttcttgggttcggagggctcgggcaatgggcag
ttcctgcgaccacagggtgtggctgtggaccaggaagggagaatcatcgtagccgattcc
agaaatcaccgcgtgcagatgtttgaggccaatggcagcttcctgtgcaagtttggtgct
caagggagtggcttcgggcagatggaccgcccctcaggtatcgcggtcaccccggatgga
ttgatcgtcgtggtggactttggcaacaatcgaatcctcatcttctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (53)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (9)   
   Pfam (9)   
All databases (83)   

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