KEGG   Mus musculus (house mouse): 65114
Entry
65114             CDS       T01002                                 
Symbol
Vps35, Mem3
Name
(RefSeq) VPS35 retromer complex component
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    65114 (Vps35)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    65114 (Vps35)
Membrane trafficking [BR:mmu04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    65114 (Vps35)
SSDB
Motif
Pfam: Vps35 FerA CENP-O Imm5 ADIP
Other DBs
NCBI-GeneID: 65114
NCBI-ProteinID: NP_075373
MGI: 1890467
Ensembl: ENSMUSG00000031696
UniProt: Q9EQH3 Q3TRJ1
Structure
Position
8:complement(85987014..86026146)
AA seq 796 aa
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSQMDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRSR
RESPESEGPIYEGLIL
NT seq 2391 nt   +upstreamnt  +downstreamnt
atgcctacaacacagcagtcaccccaggatgagcaggaaaaacttttggatgaagccatc
caggctgtgaaggttcagtcattccagatgaaaagatgcctggacaaaaacaagctgatg
gatgctctgaagcatgcctccaatatgcttggagagctccggacctctatgctgtcacca
aagagttactatgaactttatatggctatttctgatgaactgcactacttggaggtctac
ctgactgatgaatttgctaaaggaagaaaggtggcagatctctatgaacttgtacagtac
gcgggaaacattattccaaggctttatctcttgatcacagttggagttgtatatgtcaag
tcatttcctcaatccaggaaagatattttgaaagatttggtagaaatgtgccgtggtgtg
cagcatccgctaaggggtttgtttcttcgaaattaccttcttcagtgtactaggaacatt
ttacctgatgaaggagagccaacagatgaagaaacaactggtgatatcagtgattccatg
gattttgtactactcaactttgcagaaatgaataagctctgggtgcggatgcagcatcaa
ggacatagtcgagatagagaaaaaagagaacgagagagacaagaactgagaattttagtg
ggaacaaatttggtgcgccttagtcagttggaaggtgtaaatgtggaacgttacaaacag
attgttctaacaggcattctggagcaggttgtgaattgtagggatgctctggctcaggag
tatctcatggagtgcatcattcaggtttttcctgatgagtttcatcttcagactttgaat
ccttttcttagagcttgtgctgaattacaccaaaatgtaaatgtgaaaaacataatcatt
gctttaattgacagattagctttatttgctcatcgtgaagatggacccggaattccagct
gagattaaactttttgacatattttcacaacaggtggctacagtcatacagtccagacaa
gacatgccatcagaggatgttgtatctttacaagtctctctcattaatcttgctatgaaa
tgttaccctgatcgtgtggactacgtcgataaagttctagaaacaacagtggagatattc
aataagcttaaccttgaacatattgctaccagtagtgcagtttcaaaggagcttaccaga
cttttgaagatacctgttgatacttacaacaatatcttaacagtattaaagttaaagcat
ttccacccactttttgagtactttgactacgagtccagaaagagcatgagctgttatgtg
cttagtaatgttctggattataacacagaaatcgtctctcaggaccaggtagattccata
atgaatttggtgtccacattgattcaggatcagccagaccaacctgtagaagaccctgat
ccagaagacttcgctgatgaacagagccttgttggccgatttattcatctgctacgttct
gatgatcctgaccagcagtatttgattttgaatacggcacgaaaacattttggggctggt
ggaaatcagcggattcgcttcacactgccacctttggtatttgcagcttaccagttggct
tttcgatacaaagagaattcccaaatggatgacaagtgggaaaagaaatgccagaagata
ttttcatttgctcaccagactatcagtgctttgattaaagctgagctggctgaattacca
ctgagactttttcttcaaggagcattagctgctggagaaattggctttgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcattttctctatatgaagatgaaatcagtgat
tctaaagcacagctggctgctatcaccttgatcatcggtacttttgagaggatgaaatgc
ttcagtgaagagaatcatgaacccttgagaactcagtgtgcacttgctgcatcaaaactt
ctgaaaaaaccagatcaaggccgagccgtgagcacatgtgcgcatctcttttggtctggc
cgaaacacagacaaaaatggggaagagcttcatggaggtaaaagggtcatggagtgccta
aagaaggcactaaaaatagcaaatcagtgcatggacccctctctacaagttcagctcttt
atagagattctgaacaggtacatctatttctatgaaaaagaaaatgatgcggtaaccatt
caagtcttgaaccaacttattcaaaagattcgagaagatctcccaaatcttgagtccagt
gaagaaacagaacaaataaacaagcattttcacaacacattggagcacttgcgctcaaga
cgggaatcaccagagtctgaggggccaatctatgaaggtctcatcctttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (55)   
   RefSeq(nuc) (1)   
   GenBank (27)   
   EMBL (27)   
3D Structure (3)   
   PDB (3)   
Protein domain (5)   
   Pfam (5)   
All databases (100)   

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