KEGG   Mus musculus (house mouse): 65945
Entry
65945             CDS       T01002                                 
Symbol
Clstn1, 1810034E21Rik, Cst-1, Cstn1
Name
(RefSeq) calsyntenin 1
  KO
K22659  calsyntenin 1
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mmu04515]
    65945 (Clstn1)
Cell adhesion molecules [BR:mmu04515]
 Cadherins
  Cadherin related
   65945 (Clstn1)
SSDB
Motif
Pfam: CLSTN_C Cadherin Laminin_G_3 Laminin_G_2 CDC45 FAM176 EphA2_TM V_ATPase_I Glyco_hydro_16 Cadherin_C_2 SID-1_RNA_chan Zip
Other DBs
NCBI-GeneID: 65945
NCBI-ProteinID: NP_075538
MGI: 1929895
Ensembl: ENSMUSG00000039953
UniProt: Q9EPL2
Structure
Position
4:149670536..149733356
AA seq 979 aa
MLRRPAPALAPAVRLLLAGLLCGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLI
ALDKDSPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGIIRSKEKLDCEL
QKDYTFTIQAYDCGKGPDGTGVKKSHKATVHIQVNDVNEYAPVFKEKSYKAAVVEGKQHS
SILRVEAVDADCSPQFSQICSYEILTPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKKRATEDVLVKISVKPTCSPGWQGWSSRIEYEPGTGALAVFPSIHLETCDEPVASVQ
ATVELETSHIGKGCDRDTYSEKSLHRLCGAAAGTSELLPSPSSSFNWTVGLPTDNGHDSD
QVFEFNGTQAVRIPDGVVTLDPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSL
YVHGCRLVFLLRQDPSEEKKYRPAEFHWKLNQVCDEDWHHFVLNVEVPSVTLYVDGIPHE
PFSVTEDYPLHPTKIETQLVVGACWQEYSGVESGNETEPATMASAGGDLHMTQFFRGNLA
GLTVRSGKLADKKVIDCLYTCKEGLDLQVPEDANRGVQIQASSSQAVLTLEGDNVGELDK
AMQHISYLNSRQFPTPGIRRLKITSTVKCFNEAACIEVPPVEGYVMVLQPEEPKISLSGV
HHFARAASEFESAEGISLFPELRIISTITREVEPEADGSEDPTVQESLVSEEIVHDLDTC
EVTVEGDELNAEQESLEVDVTRLQQKGIEASHSDLGVVFTGVETMASYEEVLHLLRYRNW
HTRSLLDRKFKLICSELNGRYLSNEFKVEVNVIHTANPVEHANHMAAQPQFVHPEHRSFV
DLSGHNLANPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENE
MDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEDGEEEEDITSAESESSEEEEGGP
GDGQNATRQLEWDDSTLSY
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgctgcgccgccctgcgcccgcgctggccccggccgtccggctgctgctggcggggctg
ctgtgcggcggcggggtctgggccgcgcgagttaacaagcacaagccatggctcgagccc
acctaccatgggatagtcaccgagaacgataacacggtgctgctcgaccctcccctcatc
gccctggataaagattcaccgctccgctttgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggctttaaaattcacgggcagaatgtcccctttgatgccgtggta
gtggataagtccacgggtgagggaataatccggtcaaaagagaaactggactgtgaacta
cagaaagactacacattcaccatccaggcctacgactgcgggaagggccccgatggcacc
ggtgtgaaaaagtctcacaaagcgaccgtgcacatccaggtgaacgacgtgaacgagtac
gcccccgtgttcaaggagaagtcgtacaaggcggccgtggtggagggcaagcagcacagc
agcatcctcagggtggaggctgtggacgcagactgctccccgcagttcagccagatctgc
agctacgagattctcaccccagacgtgccgttcactgtggacaaagacggttatattaag
aacacagagaagctaaactatggcaaagagcatcagtataagctcacagtcacagcctac
gactgtgggaagaaaagagccaccgaggacgtcctagtgaagataagcgtcaagcccacc
tgcagccccgggtggcaaggctggagcagcagaattgagtatgagcccggcacgggtgct
ttggctgtcttcccgagcatccacttggagacctgtgacgagcctgtcgcctctgtgcag
gccacggtggagctggagaccagccacatagggaaaggctgcgaccgagatacctactct
gagaagtcccttcaccggctctgtggggctgctgccggcacctcagagctgctcccgtcc
cccagtagctccttcaactggactgtgggcctccccaccgacaacggccatgacagtgac
caggtctttgagttcaacggcacgcaggccgtgaggattccagacggcgttgtgaccctt
gaccctaaagaaccctttacaatctccgtgtggatgcggcatgggccgtttggccggaag
aaggagacaattctctgcagttcggataagacagatatgaaccgacaccattattcgctc
tacgtccacgggtgcaggctagttttcctcctccgtcaggacccgtctgaggagaagaaa
tacaggcctgcggagttccactggaagctgaaccaagtctgtgatgaggactggcaccac
tttgtcctcaatgtggaagttccaagtgtgactctctacgtggacggcatccctcatgag
cccttctctgtgacagaggactacccgcttcatccaaccaaaatagagactcagcttgtg
gtcggagcttgctggcaagagtattcaggagtggagagtggcaatgagactgagcctgcg
acgatggcctctgcaggtggcgacctgcacatgacacagtttttccgaggtaacctggct
ggcctcacagtccgttctgggaaactggcggataagaaggtgattgactgtctctacacc
tgcaaggaggggctggacctgcaggtccctgaagatgccaacagaggcgtgcagatccaa
gcaagctccagccaggcggtcttgaccttggagggagacaacgttggagagctggataag
gctatgcagcacatttcctaccttaactcaaggcagttccccacaccaggcatccgcagg
ctcaaaatcaccagcaccgtcaagtgtttcaacgaggcggcttgcatcgaggtgcccccg
gtggaaggctacgtgatggttttgcagccggaggagcctaagatcagcctgagtggcgtc
caccactttgcccgcgcagcttctgagtttgagagcgcggagggtatttccctcttccct
gagctgagaatcatcagcaccatcaccagagaggtggagcccgaggcagatgggtccgag
gaccccacagtgcaagaatccctggtgtcagaggaaattgtgcatgacctggacacctgt
gaggtcacagtggaaggggatgagctgaacgcagagcaggagagcctggaggtagacgtg
acccgcctccagcagaagggcatcgaagcaagccactctgacctgggtgtggtcttcaca
ggcgtggagaccatggcaagctacgaggaggttttgcacctccttcgctatcggaattgg
cacaccaggtccctgctggatcgcaagttcaagctcatttgctcagaactaaatggtcgc
tacctcagcaatgagttcaaggtggaggtgaatgtgatccacacagccaaccccgtggaa
catgccaaccacatggctgcccagccacagttcgtccaccctgaacatcgatcctttgtg
gacctgtctggtcacaacctggccaatcctcacccgtttgcagttgtccccagcacggcg
acagtggtgattgtggtgtgtgtcagcttcctggttttcatgatcatcctgggggtgttt
cggatccgggctgcacatcagcgaacgatgcgggaccaggacacggggaaggagaatgag
atggactgggatgactctgccttgaccatcaccgtcaaccccatggagacatatgaggac
cagcacagcagtgaggaggaggaagaggaggaggaggaggaggagagcgaagatggggag
gaagaggaagacatcaccagtgccgagtctgagagcagtgaggaggaggaaggaggcccc
ggagacggccagaatgccacccgacagctggaatgggatgactccacactcagctactaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (43)   
   RefSeq(nuc) (7)   
   GenBank (18)   
   EMBL (18)   
3D Structure (1)   
   PDB (1)   
Protein domain (12)   
   Pfam (12)   
All databases (87)   

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