KEGG   Mus musculus (house mouse): 66420
Entry
66420             CDS       T01002                                 
Symbol
Polr2e, 2410021N14Rik, 25kDa, RPB5, XAP4
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide E
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03020  RNA polymerase
mmu03420  Nucleotide excision repair
mmu04623  Cytosolic DNA-sensing pathway
mmu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    66420 (Polr2e)
  09124 Replication and repair
   03420 Nucleotide excision repair
    66420 (Polr2e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    66420 (Polr2e)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    66420 (Polr2e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    66420 (Polr2e)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    66420 (Polr2e)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     66420 (Polr2e)
  RNA polymerase III system
   RNA polymerase III
     66420 (Polr2e)
  RNA polymerase I system
   RNA polymerase I
     66420 (Polr2e)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      66420 (Polr2e)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C
Other DBs
NCBI-GeneID: 66420
NCBI-ProteinID: NP_079830
MGI: 1913670
Ensembl: ENSMUSG00000004667
UniProt: Q80UW8 Q3V214
Position
10:complement(79871787..79875493)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYVLEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRESQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacctaccggctgtggaagatccgcaagacgatcatgcagctg
tgtcatgaccgtggctacctggtgacccaggatgaactggaccagacacttgaggaattc
aaggcgcagtttggggacaagcccagcgaaggacggccaaggcgcacagacctcacggtg
ctggtggcccacaacgatgaccccacagaccagatgtttgtgttcttcccagaggagccc
aaggtgggcatcaagaccatcaaggtatactgccagcgcatgcaggaggaaaacatcaca
cgggcgctgattgtggtgcagcagggcatgacgccctccgccaagcagtccctggtggac
atggccccgaagtatgtgctggaacagtttctacagcaggagctgctcatcaatatcaca
gagcacgagctagtccctgagcacgtggtcatgacaaaggaggaggtgactgaactgctg
gctcgatacaagcttcgtgagagccagctacccagaatccaggccggggacccagtggca
cggtactttgggatcaagcgagggcaggtcgtgaagatcatccgccccagtgagacggct
ggccgctacatcacctaccgcctggtgcagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (23)   
   RefSeq(nuc) (1)   
   GenBank (11)   
   EMBL (11)   
Protein domain (2)   
   Pfam (2)   
All databases (57)   

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