KEGG   Mus musculus (house mouse): 665033
Entry
665033            CDS       T01002                                 
Symbol
Col6a5, Col29a1, EG665033, Gm7455
Name
(RefSeq) collagen, type VI, alpha 5
  KO
K06238  collagen type VI alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04151  PI3K-Akt signaling pathway
mmu04510  Focal adhesion
mmu04512  ECM-receptor interaction
mmu04820  Cytoskeleton in muscle cells
mmu04974  Protein digestion and absorption
mmu05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    665033 (Col6a5)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    665033 (Col6a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    665033 (Col6a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    665033 (Col6a5)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    665033 (Col6a5)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    665033 (Col6a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmu04147]
    665033 (Col6a5)
   00536 Glycosaminoglycan binding proteins [BR:mmu00536]
    665033 (Col6a5)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   665033 (Col6a5)
Glycosaminoglycan binding proteins [BR:mmu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   665033 (Col6a5)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   665033 (Col6a5)
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 VWA_CoxE Copine DUF2529
Other DBs
NCBI-GeneID: 665033
NCBI-ProteinID: NP_001161395
MGI: 3648134
Ensembl: ENSMUSG00000091345
UniProt: A6H584 A0A140T8W1
Position
9:complement(105733269..105839743)
AA seq 2640 aa
MKLRLIAFVLILWTETLADQSPGPGPEYADVVFLVDSSNYLGIKSFPFVRTFLNRMISSL
PIEANKYRVALAQYSDALHNEFQLGTFKNRNPMLNHLKKNFGFIGGSLKIGNALQEAHRT
YFSAPTNGRDKKQFPPILVVLASAESEDDVEEAAKALREDGVKIISVGVQKASEENLKAM
ATSQFHFNLRTARDLGMFAPNMTRIIKDVTQYREGTTVDLITAVAPTTPAAPATPAAPTI
PAALTTAANHVDKTVPFPTSCQKDSLADLIFLVDESVGTTQNLRDLQNFLENVTSSVDVK
DNCMRLGLMSFSDRAQTISSLRSSANQSEFQQQIQKLSLQTGASNVGAAIEQMRKEGFSE
SSGSRKAQGVPQIAVLVTHRASDDMVREAALDLRLEGVTMFAMGIEGANNTQLEDIVSYP
SRQSISTHSSYSHLESYSGNFLKKIRNEIWTQVSTRAEQMELDKTGCVDTKEADIYFLID
GSSSIRKKEFEQIQIFMSSVIDMFPIGPNKVRVGVVQYSHKNEVEFPVSRYTDGIDLKKA
VFNIKQLKGLTFTGKALDFILPLIKKGKTERTDRAPCYLIVLTDGKSNDSVLEPANRLRA
EQITIHAIGIGEANKTQLRQIAGKDERVNFGQNFDSLKSIKNEIVHRICSEKGCEDMKAD
IMFLVDSSGSIGPTNFETMKTFMKNLVGKIQIGADRSQVGVVQFSDYNREEFQLNKYSTH
EEIYAAIDRMSPINRNTLTGGALTFVNEYFDLSKGGRPQVRKFLILLTDGKAQDEVGGPA
TALRSKSVTIFSVGVYGANRAQLEEISGDGSLVFHVENFDHLKAIESKLIFRVCALHDCK
RIELLDIVFVLDHSGSIGPREQESMMNLTIHLVKKADVGRDRVQIGALTYSNHPEILFYL
NTYSSGSAIAEHLRRPRDTGGETYTAKALQHSNVLFTEEHGSRLTQNVRQLMIVITDGVS
HDRDKLDEAARELRDKGITIFAVGVGNANQDELETMAGKKENTVHVDNFDKLRDIYLPLQ
ETLCNNSQETCNLPEADVIFLCDGSDMVSDSEFVTMTTFLSDLIDNFDIESQRMKIGMAQ
YGSRYQEIIELESSLNKTQWKSQVHSVAQSKGLPRLDFALKHVSDMFDPSVGGRRNAGVP
QTLVVITSSSPRYDVTDAVKVLKDLGICVLALGIGDVYKEQLLPITGNSEKIITFRDFNK
LKNVDVKKRMVREICQSCGKANCFVDVVVGFDISTHRQGQPLFQGHPRLESYLPGILEDI
TSIRGVSCGAGAEAQVSLAFKVNSDQEFPAKFQIYQKAAFDSLLHVTVRGPTHLDAPFLQ
SLWDMFEERSASRGQVLLIFSDGLQGESITLLERQSDRLREAGLDALLVVSLNTFGHDEF
SSFEFGKGFDYRTQLTIGMLDLGKTLSQYLGNIAERACCCTFCKCPGIPGPHGTRGLQAS
KGSSGPKGSRGHRGEDGDPGRRGEIGLQGDRGVVGCPGTRGQKGVKGFSGAQGEHGEDGL
DGLDGEEGFYGFRGGKGQKGDPGNQGYPGIRGAAGEDGEKGFPGDPGDPGKDSNIKGQKG
EKGERGRQGITGQKGTHGRPSSKGSRGMEGQRGPQGPSGQAGNPGPQGTQGPEGLQGSQG
SSGNRGGKGDKGSQGYQGPQGSPGPAGPRGDIGRPGFGGRKGEPGVPGGPGPVGPPGQRG
KQGDYGIPGYGQTGRKGVKGPTGFPGDPGQKGDAGNPGIPGGPGPKGFKGLTLSQGLKGR
SGLQGSQGPPGRRGPKGTAGQPIYSPCELIQFLRDHSPCWKDKCPVYPTELVFALDQSSG
ITERRFNETRDTITSIVSDLNIRENNCPVGARVAVVSYDSDTSYLIRGSDYHNKKHLLQL
LSQIKYQVPRKARDIGNAMRFVARNVFKRMSAGTNTRRVAVFFSNGQAASRASILTATME
LSALDISLAVFAYNERVFLDEAFGFDDTGTFQVIPVPPVGDYEPLEKLRRCTLCYDKCFP
NTCAEEPFFPENSYMDVAFLLDNSKNIASDDFQAVKALVSSVIDSFHITSNPSASESGDR
VALLSYSPSESSRRKGRVKTEFAFTTYDNQSIMKNYIYTSLQQLNGDATIGLALQWAMEG
LFLGTPNPRKHKVIIVISAGENHEEKEFVKTVALRAKCQGYVVFVISLGSTQRDEMEELA
SYPLDHHLIQLGRMYKPDLNYIVKFLKPFIYSVRRGFNQYPPPTLKDDCRLVELERGDTL
PHGLRLTAKLREVPESTISLADQELNAGKDSSFVLEDHRGDHLVYVPSQMLEPHKLVSHY
GNDRESVAMASLTSEHESHGREELGLAHEPGDASLQEYYMDVAFLIDASQRVGGRNEFKE
VRTLITSVLDYFHIAPAPLTSVLGDRVAVLTYSPPGYLPNTEECPVYLEFDLVTYNTVHQ
MKHHLQESLQQLNGDVFIGHALQWTVDNVFVGTPNLRKNKVIFIVTAGETNPLDKEVLRN
ASLRAKCQGYSIFVFSFGPIHNDMELEELASHPLDHHLVRLGRVHRPDLDYVIKFIKPFV
HSIRRAINKYPGRDLQAKCDNLTFPGPENAGTEDSALLIPEVYRIEAGENELSGDSGSQE
QHFFLLGNSHGNHSESTADLMRQLYLLLSSGELMVNDKEEPCSAETPAPVNSKQDGEDAR
NT seq 7923 nt   +upstreamnt  +downstreamnt
atgaagctccggctaattgcgtttgtcttaatcctctggactgaaaccctggcagaccag
agcccagggccaggccccgagtacgcagacgtggtgtttctggtggacagctccaattac
ctgggaattaagtccttcccatttgtgagaacttttctcaacaggatgatcagcagcctc
cccatagaggccaacaagtaccgcgtggccctggcccagtacagcgatgctctccacaat
gagttccagctgggcaccttcaagaacaggaaccccatgctgaaccacctgaagaagaac
ttcgggttcatcggtggctccctgaagatagggaacgccctgcaggaggctcacaggacc
tatttctctgctcccacaaatgggagagacaagaaacagttccccccaatcctggtggtg
ctggcttcagcagagtctgaggatgatgtggaagaggctgcgaaggccctgcgggaagat
ggggtgaaaatcatctctgtgggggtgcagaaggcttctgaggaaaacctgaaggcgatg
gccacctctcagttccatttcaatctcaggactgccagagacctcggcatgtttgcccca
aacatgacacggatcatcaaggatgtgactcagtacagggaagggacaactgtggactta
atcacagctgtagccccaaccacacctgcagccccagccacacctgcagccccaaccata
cctgcagctctaaccacagctgccaaccacgttgataagacagttccctttcccacctct
tgccagaaggactcccttgccgaccttatattcttggtggatgagtcagtggggaccaca
cagaatctgagggacctgcagaacttcctggagaatgtcaccagctctgtggatgtgaag
gacaactgcatgcggcttgggctgatgagcttcagcgacagggctcagactatttcttcc
ctgaggtcaagcgccaaccagtctgaattccagcagcaaatccagaaactctctctccag
actggggcatctaatgttggggccgccattgagcagatgaggaaagaaggcttctcagag
tccagtggcagcaggaaggcccagggcgtcccccagattgctgtgctggtcacccacaga
gcatcagatgacatggtgcgggaggctgcactggatctgcgcttggagggtgtaactatg
tttgcaatgggcatcgaaggggccaacaacacgcaattagaagacatagtgtcataccct
tccaggcagagcatttccacacacagctcctacagtcacttggaatcatacagtgggaac
ttcctgaagaagatccgcaatgaaatctggacccaagtttctactcgtgctgaacaaatg
gagctggataaaaccggctgtgtggatacaaaggaggccgacatctattttctcattgat
gggtcgtccagcatccgtaagaaagagtttgagcaaatccagatatttatgtcatctgtg
atagacatgtttcctatcggccccaacaaagttcgggtcggagttgtgcagtattcacat
aagaatgaagtggaatttcctgtctctcgctacacggatggcattgacttgaaaaaggct
gtttttaacatcaagcaactcaaaggtcttacattcaccgggaaagccctggatttcata
ttgcctctcataaagaagggaaaaacagagaggaccgacagagccccctgttacctcatc
gtgctgactgatggaaagtcaaatgacagcgttctcgaacctgccaacagactgcgggct
gagcagatcaccattcacgccatcgggattggcgaggcaaacaaaacacagctgcggcag
attgctgggaaggacgaaagggttaacttcgggcagaacttcgattctctgaagagcata
aaaaatgaaatcgttcaccgcatctgctctgaaaaaggatgtgaagacatgaaggcagac
atcatgtttttggtggacagttctggaagcatagggcctacaaattttgagacaatgaaa
actttcatgaaaaatctggtggggaagattcagattggcgccgacagatcccaagtcggt
gttgttcaattcagtgactataacagggaagaattccagcttaataaatactccacgcat
gaggaaatttatgcagccatagataggatgtctcccatcaacagaaacactctgacagga
ggagcactaacctttgtaaatgaatactttgacctttccaagggggggcgcccccaggtc
agaaagttccttatcctcctcacagatggaaaagctcaggacgaagtggggggcccagcc
acggctctcaggagcaaaagtgtgaccatcttctccgtgggtgtgtatggggccaatagg
gctcagctggaggagatcagtggagatggcagtctggttttccatgttgagaactttgac
catctgaaggccatagagagtaaactcatctttcgagtgtgtgctctgcatgattgcaag
aggatcgaactcttagacatcgtgtttgtgctggaccactcaggcagcataggtccacgt
gagcaagaaagcatgatgaacctcaccatccacttggtgaagaaggcagacgttggtagg
gaccgagtgcagattggagcgctcacatactccaaccatcccgagatcctcttctatctt
aacacttactcaagtggatcagccattgctgagcatctgaggaggcccagggacaccgga
ggggagacctacactgccaaggctcttcagcattccaacgtcctgttcacagaagagcat
ggcagccgcctgacgcagaacgtgaggcagctgatgattgtcatcacggatggcgtgtcc
cacgaccgagataaactcgacgaggcagcacgggaactcagagacaaaggcatcaccatc
tttgcagtgggtgtaggaaatgccaaccaagatgaactggagaccatggcagggaagaaa
gaaaacactgtccatgtagacaactttgacaaactgagagatatttacctgcctctgcaa
gagactctgtgtaataattcacaagagacttgtaaccttccggaagctgatgtgattttc
ctttgtgatggctctgacatggtgtctgattcagagttcgttaccatgacaactttcttg
tcagacttaattgataattttgacattgagtctcaaagaatgaagattgggatggctcaa
tacgggagccggtatcaggaaattattgagttggaaagctctctgaacaagactcagtgg
aagtctcaggtccacagtgtggcccagagcaaggggttgccacgccttgactttgctctc
aagcatgtgagtgacatgtttgatccatccgttggcgggagaaggaacgctggtgtccct
cagactctggttgttataacatctagttctccacgctatgatgtgacagacgcggtaaag
gtcctgaaagaccttggcatctgtgtcctggctttgggcataggggatgtttataaggaa
cagcttctgcccatcacaggcaattcagaaaagataattactttccgagactttaataag
ctaaagaatgtggatgtgaagaagagaatggttcgtgaaatttgccagagctgtgggaaa
gccaattgctttgtggatgtagtggtcgggttcgacatttccactcaccgtcagggccag
cctttgttccagggccatccccgcttagaatcctacctcccgggcatcttggaggacatc
acctctatcagaggggtgagctgtggtgcaggtgcagaggcgcaggtgagcctggccttt
aaggtgaacagtgaccaagagttcccagccaagttccagatctatcagaaagcagcgttt
gacagcttgttgcacgtcacagtccgtggaccaactcatctggatgcaccgttcttgcag
tcactttgggacatgtttgaggaaagatctgcatccaggggccaggttctgctcatcttc
tcagacggtctccagggtgaaagcatcaccttgctggagcggcagtcagacaggctcaga
gaagcaggacttgatgctctgttggtggtgtcccttaacacattcggtcacgatgagttt
tccagctttgaatttggaaaaggatttgactacaggactcagctgaccattgggatgcta
gacctgggcaagacgctctcacagtacctgggaaacatcgcagaaagggcttgctgctgt
acattttgtaaatgtccggggattccaggacctcatggaacccggggactccaagcctca
aagggttcttcaggtccaaaaggtagcagaggacacaggggagaggacggagaccctgga
agacgaggagaaattgggcttcaaggagacagaggagtcgtgggatgcccggggactcga
ggtcaaaagggagtcaaaggattttcaggagctcagggggaacatggagaggacgggctg
gacggactggatggagaagaaggattttacggatttcgtgggggaaagggacaaaaaggt
gaccctggcaatcagggttacccaggcatcagaggcgctgctggggaagatggcgagaag
ggcttcccaggggatcccggtgacccaggaaaagacagcaacatcaaaggccagaagggc
gagaaaggagaacgaggaagacaagggataactgggcagaaggggacacatggccgtcct
agctccaaaggaagcaggggaatggagggccagagggggccccagggtccctcagggcag
gcaggaaacccaggacctcaaggtacacaaggacctgaaggactacaaggctcacaggga
tcaagtggaaatcgtggagggaaaggagacaaaggaagtcaaggttatcagggacctcag
ggttctcctgggccagcaggacccagaggggatattggaagacctggatttggggggaga
aagggggaacctggagttcctggaggcccaggaccagtggggccccctggacagcgagga
aagcagggagattatggcatcccgggctatggtcagacaggaagaaaaggagttaagggc
ccaacaggattccctggggacccagggcagaagggtgacgctggcaatcctggaattcct
gggggacctggacccaaaggattcaagggactgactctctctcaaggcttgaaaggcagg
agtggacttcaggggtctcaaggccctcctggtcggagaggtcctaaaggcacagcaggg
caacctatatattccccctgtgaactgatccagttcctgagggaccacagcccctgttgg
aaagacaagtgccctgtgtatccaacagagctggtctttgctctggaccagtcctctggt
atcacagaaaggagatttaatgaaacaagggacaccatcacttcaattgtcagtgacctc
aacatcagggagaacaactgtcccgtgggagcacgggttgccgtggtctcctatgactca
gacaccagctatctcatccgtggctctgactaccataacaagaagcatctcctacagctt
ctttcccagataaaataccaagtgccccggaaggccagggacattggcaatgcaatgagg
tttgtggcccgcaacgttttcaagcggatgtctgcgggaaccaacaccaggagagtggct
gtgtttttcagcaatggccaggcagccagtagagcatccatcctcacggccaccatggag
ttgagtgccctcgatatcagccttgccgtctttgcttataacgaaagagtgttccttgat
gaggcttttgggtttgatgacactgggacatttcaggtgattccagtccccccagttgga
gattatgagccactggagaagcttcggcgctgcacactttgctatgacaagtgttttcca
aacacctgtgcagaagagcctttctttcctgagaattcctacatggatgttgcattcctc
ttagacaattccaaaaacatcgccagcgatgacttccaagccgtgaaagcgctggtgagc
tcagtgattgacagcttccacatcacttcaaacccttcagcctcagagtctggtgacagg
gttgctttgctgagctattctccctcagagagctccagaaggaagggcagggtgaagaca
gagtttgcctttacaacctacgacaaccaatcaatcatgaagaactacatctacacttcc
cttcaacagctcaatggagatgctactattggccttgccctacagtgggccatggaaggt
ctcttcctgggaacccccaatccaagaaaacacaaggtcatcattgtgatttcagctgga
gaaaaccatgaggagaaggaatttgtgaagacggtggctttgagggccaaatgtcaaggc
tatgtcgtatttgtgatatctctgggctccacacaaagagatgagatggaagaattagcc
agctacccactcgatcaccatctgatacagcttgggagaatgtacaagccagatctgaat
tatattgtgaaatttctgaagccctttatatactcggtcagacgcggatttaatcaatac
ccaccacccacgctgaaggacgactgcagacttgttgagttagagaggggagacacactg
ccccatggcctcagattgactgctaagctgcgtgaggttcctgagagcacaatcagcctg
gctgatcaagagctgaacgctgggaaagactcatcttttgtgttggaggatcacagaggc
gaccatttggtttacgttccaagccagatgctagagccacataagttagtgagccactat
ggaaatgaccgggaatctgtagcaatggcgagtctcacttctgaacatgaaagtcatggc
agagaagaactgggtcttgctcatgagcctggggatgcttctcttcaagaatattacatg
gacgtggctttcctcatagatgcttctcaacgagtaggaggacgtaacgagtttaaggaa
gtgagaactttgataacgtcagtactggattactttcacattgccccagctccactgacc
tctgtcttaggagacagagtggctgtcctgacctactctcccccaggctatctgccaaac
actgaagagtgcccagtctacctggaattcgatttggtcacttacaacactgtacatcaa
atgaagcatcatctccaagagtctcttcagcagctcaatggtgatgtttttattgggcat
gcccttcagtggacagttgacaatgtctttgtaggaacccccaatctgaggaaaaacaaa
gttatctttatagtaactgcaggtgaaaccaaccctttagacaaagaagttttaaggaat
gcatctctgagagccaagtgccaaggctactccatatttgtattttcctttggtccgata
cacaatgacatggagttagaagaattagcaagccaccctctggatcatcacttagtccgg
cttggccgggtacacaggccagatttggactatgtcatcaagttcatcaagccatttgtt
cattcgatcagacgtgctatcaacaaatatcccggcagagacctgcaagccaagtgtgat
aatctcaccttccctggcccagagaatgctggcacagaagacagtgcattactcatcccc
gaggtgtacagaatcgaggcaggagagaatgagctgtctggagactctggatctcaggag
cagcatttcttcctcctagggaacagtcatggcaaccattcagaaagcactgctgatctg
atgcggcagttgtacctgctcctctcctccggggaactgatggtgaatgataaggaagag
ccttgttccgcagagaccccagctccagtgaacagcaaacaagatggcgaagatgcaaga
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (85)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (78)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (11)   
   RefSeq(nuc) (3)   
   GenBank (4)   
   EMBL (4)   
Protein domain (7)   
   Pfam (7)   
All databases (119)   

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