KEGG   Mus musculus (house mouse): 66583
Entry
66583             CDS       T01002                                 
Symbol
Exosc1, 2610035C18Rik, 2610104C07Rik, 2610312F07Rik
Name
(RefSeq) exosome component 1
  KO
K07573  exosome complex component CSL4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    66583 (Exosc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    66583 (Exosc1)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     66583 (Exosc1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     66583 (Exosc1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1 Nairovirus_NSm
Other DBs
NCBI-GeneID: 66583
NCBI-ProteinID: NP_079920
MGI: 1913833
Ensembl: ENSMUSG00000034321
UniProt: Q9DAA6
Position
19:complement(41911417..41921836)
AA seq 195 aa
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKTSENGAVPVVSVMRETE
SQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq 588 nt   +upstreamnt  +downstreamnt
atggcaccaccggtgaggtactgcatccccggcgaacgtctgtgtaacttggaggaaggc
agccccggcagcggcacctacacccggcatggctacatcttttcgtcgctggctggctgc
ctgatgaagaccagcgagaatggcgcggttcccgtggtgtcagtgatgagagaaacagag
tcccagttgcttccagatgtgggagctgtcgtcacctgtaaggtctctagcatcaactca
cggtttgccaaagtacacatcctgtatgtgggatccacaccactcaaaaatgcttttcga
ggaactatccgcaaagaagatatccgagcaactgaaaaagacaaggtagaaatttacaag
agttttcggccaggtgacatagttttggccaaagttatctccctaggcgatgcacagtcc
aattacctgctgactactgctgaaaacgagctgggcgttgtggtggcccacagtgagtca
ggtgttcagatggttcccatcagctggtgtgagatgcagtgccccaagacccacactaaa
gaattccgaaaagtggcccgagtacagcccgagttcctacagacctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (12)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (10)   
DNA sequence (26)   
   RefSeq(nuc) (10)   
   GenBank (8)   
   EMBL (8)   
Protein domain (4)   
   Pfam (4)   
All databases (62)   

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