KEGG   Mus musculus (house mouse): 67089
Entry
67089             CDS       T01002                                 
Symbol
Psmc6, 2300001E01Rik
Name
(RefSeq) proteasome (prosome, macropain) 26S subunit, ATPase, 6
  KO
K03064  26S proteasome regulatory subunit T4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03050  Proteasome
mmu05010  Alzheimer disease
mmu05012  Parkinson disease
mmu05014  Amyotrophic lateral sclerosis
mmu05016  Huntington disease
mmu05017  Spinocerebellar ataxia
mmu05020  Prion disease
mmu05022  Pathways of neurodegeneration - multiple diseases
mmu05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    67089 (Psmc6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    67089 (Psmc6)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    67089 (Psmc6)
   05012 Parkinson disease
    67089 (Psmc6)
   05014 Amyotrophic lateral sclerosis
    67089 (Psmc6)
   05016 Huntington disease
    67089 (Psmc6)
   05017 Spinocerebellar ataxia
    67089 (Psmc6)
   05020 Prion disease
    67089 (Psmc6)
   05022 Pathways of neurodegeneration - multiple diseases
    67089 (Psmc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:mmu03051]
    67089 (Psmc6)
Proteasome [BR:mmu03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     67089 (Psmc6)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 AAA_2 AAA_5 AAA_22 PRS7_OB RuvB_N nSTAND3 Prot_ATP_ID_OB_N AAA_14 DUF815 AAA_18 AAA_7 AAA_33 AAA_11 TIP49 RNA_helicase AAA_3 Mg_chelatase TPR_MLP1_2 bpMoxR DUF5906 AAA_24 AAA_28 TsaE ATPase AAA_25 NACHT AAA_17 Occludin_ELL ATPase_2 Parvo_NS1 IstB_IS21 COG4_N DUF4140 Med4 AAA_19
Other DBs
NCBI-GeneID: 67089
NCBI-ProteinID: NP_080235
MGI: 1914339
Ensembl: ENSMUSG00000021832
UniProt: P62334 Q14AQ1
Position
14:45567285..45587150
AA seq 389 aa
MADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD
FVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggcggaccctagagataaggcgcttcaggactatcgcaagaagctgctagagcacaag
gagattgacggccgtcttaaggagctaagggaacaattaaaagaacttaccaagcagtat
gaaaagtctgaaaatgatttgaaggcactacaaagtgttggacagattgtaggtgaagtg
ctaaaacagttaacagaagaaaaattcatcgttaaagcaacaaatggaccaagatacgtt
gtaggttgtcgtcgtcagcttgacaaaagtaagctgaagccaggaaccagagttgctttg
gatatgaccacactaaccatcatgagatatctgccaagagaggtggatccattggtttat
aacatgtctcacgaggatcctggaaatgtatcttattctgagattggaggcctgtcagaa
cagattcgggagttaagagaggtaatagaattgcctcttacaaatccagaattattccag
cgtgtaggaataatacctccaaaaggctgtttgctctatggaccgccaggcactgggaaa
acactcttggcacgagctgttgccagccagctggactgcaacttcctaaaggttgtatct
agttctattgtagacaagtacattggtgaaagtgctcgtttgattagagaaatgtttaat
tatgccagggaccaccagccatgcatcatttttatggatgaaatagatgctattggtggc
cgtcggttttctgagggaacatcagctgacagagagattcagagaactttaatggagtta
ctaaatcaaatggatggatttgatactctgcatagagttaaaatgatcatggctacaaac
agaccagatacactggatcctgctttgctgcgcccaggaagattagatagaaaaatacat
atcgatttaccaaatgaacaagcaagattagatatattgaaaatccacgcaggacctatt
acaaagcatggtgaaatagattatgaagcaattgtaaagctttcagatggctttaatgga
gcagacctgagaaatgtttgtactgaagcaggtatgtttgcaattcgtgccgatcatgat
tttgtagttcaggaagacttcatgaaagcagtcaggaaagtggctgactccaagaagctg
gagtccaagctggactacaaacctgtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (24)   
   RefSeq(nuc) (2)   
   GenBank (11)   
   EMBL (11)   
Protein domain (39)   
   Pfam (39)   
All databases (120)   

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