KEGG   Mus musculus (house mouse): 68553
Entry
68553             CDS       T01002                                 
Symbol
Col6a4, 1110001D15Rik, Dvwa, EG235580, Vwa6
Name
(RefSeq) collagen, type VI, alpha 4
  KO
K06238  collagen type VI alpha
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04151  PI3K-Akt signaling pathway
mmu04510  Focal adhesion
mmu04512  ECM-receptor interaction
mmu04820  Cytoskeleton in muscle cells
mmu04974  Protein digestion and absorption
mmu05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    68553 (Col6a4)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    68553 (Col6a4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    68553 (Col6a4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    68553 (Col6a4)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    68553 (Col6a4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    68553 (Col6a4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmu04147]
    68553 (Col6a4)
   00536 Glycosaminoglycan binding proteins [BR:mmu00536]
    68553 (Col6a4)
Exosome [BR:mmu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   68553 (Col6a4)
Glycosaminoglycan binding proteins [BR:mmu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   68553 (Col6a4)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   68553 (Col6a4)
SSDB
Motif
Pfam: VWA VWA_2 Collagen VWA_3 VWA_CoxE KOW
Other DBs
NCBI-GeneID: 68553
NCBI-ProteinID: NP_081039
MGI: 1915803
Ensembl: ENSMUSG00000032572
UniProt: A2AX52 Q9CTL0
Position
9:complement(105867284..105975729)
AA seq 2309 aa
MGTWKTFWLIISLAAGLGFVKSQRIVCREASVGDIVFLVHNSINPQHAHSVRNFLYILAN
SLQVGRDNIRVGLAQYSDTPTSEFLLSVYHRKGDVLKHIRGLQFKPGGNRMGQALQFILE
HHFREGAGSRASQGVPQVAVVVSSGLTEDHIREPAEALRRAGILVYAIGVKDASQAELRE
ISSSPKDNFTFFVPNFPGLPGLAQKLRPELCSTLGKAAQYTERESPACSEASPADIVFLV
DSSTSIGLQNFQKVKHFLHSVVSGLDVRSDQVQVGLVQYSDNIYPAFPLKQSSLKSAVLD
RIRNLPYSMGGTSTGSALEFIRANSLTEMSGSRAKDGVPQIVVLVTDGESSDEVQDVADQ
LKRDGVFVFVVGINIQDVQELQKIANEPFEEFLFTTENFSILQALSGTLLQALCSTVERQ
MKKSTKTYADVVFLIDTSQGTSQASFQWMQNFISRIIGILEVGQDKYQIGLAQYSDQGHT
EFLFNTHKTRNEMVAHIHELLVFQGGSRKTGQGLRFLHRTFFQEAAGSRLLQGVPQYVVV
ITSGKSEDEVGEVAQILRKRGVDIVSVGLQDFDRAELEGIGPVVLVSDLQGEDRIRQLML
DVNMFIQGSPKPPRVMTDVAKDAVEECLVPVPADLVFLVEDFSSARQPNFQRVVHFLTTT
VHSLNIHPDTTRVSLVFYSEKPRLEFSLDMYQSAAQVLRHLDRLTFRARRGRAKAGAALD
FLRKEVFLPEKGSRPHRGVQQIAVVIIESPSLDNVSTPASYLRRAGVTIYAAGTQPASES
KDLEKIVTYPPWKHAIRLESFLQLSVVGNKLKKKLCPEMLSGMPPLMSFIPESTRQSTQE
GCESVEKADIYFLIDGSGSIKPNDFIEMKDFMKEVIKMFHIGPDRVRFGVVQYSDKIISQ
FFLTQYASMAGLSAAIDNIQQVGGGTTTGKALSKMVPVFQNTARIDVARYLIVITDGQST
DPVAEAAQGLRDIGVNIYAIGVRDANTTELEEIASKKMFFIYEFDSLKSIHQEVIRDICS
SENCKSQKADIIFLIDGSESIAPKDFEKMKDFMERMVNQSNIGADEIQIGLLQFSSNPQE
EFRLNRYSSKVDMCRAILSVQQMSDGTHTGKALNFTLPFFDSSRGGRPRVHQYLIVITDG
VSQDNVAPPAKALRDRNIIIFAIGVGNVQRAQLLEITNDQDKVFQEENFESLQSLEKEIL
SEVCSSQGCNIDLSVGVDTSTSSERAQQELRRLLPELMQQLAFLSNISCEAPGQMEPRFR
YVVPGSSDQPVFDSGFEKYSDETIQKFLVHQGSVNNRMDVDFLQSLGETAIHLSLAKVKV
LLVFTDGLDEDLERLRRTSEFLRSRGLSGLLLIGLGGAHKLEELQELEFGRGFAYRQPLS
SSLPSLPSVLLKQLDTIVERTCCNMYAKCYGDDGIRGEPGSRGEQGERGLDGLPGHPGEE
GDHGQRGPRGLPGLRGEEGCPGVRGPKGARGFSGEKGNPGEEGVGGLDGEQGDRGAAGPS
GEKGSSGSRGLTGLPGPAGPRGEPGLRGDPGDPGIDNLIQGPKGEKGRRGHQGSPGFHGP
LGEAGSVGPRGSLGRHGLPGLKGVLGETGELGSRGEPGHPGPQGPRGRQGPPGFFGQKGD
PGTQGNPGLPGPSGSKGPDGPRGLKGEVGPAGERGPRGQQGPRGQPGLFGPDGHGYPGRK
GRKGEPGFPGYPGVQGEDGNPGRGGEKGAKGIRGKRGNSGFPGLAGTPGDQGPPGKMGTK
GSKGLADRTPCEIVDFVRGNCPCSTGISRCPAFPTEVVFTLDMSNDVAPSDFERMRNILL
SLLMKLEMCESNCPTGARVAIVSYNTRTDYLVRLSDHRGKAALLQAVRKIPLERSSGSRN
LGATMRFVARHVFKRVRSGLLVRKVAVFFQAGRNYDTASVSTATLELHAADIATAVVTFT
EEHNLPEAGLVDGPNEFHLFTWETEGQQDVERLASCTLCYDKCRPALGCQLRAPGPQKLD
MDLVFLVDSSQGVSRDIYLGALRLVDSVLKDLEVAAQPGTSWHGARAALLTHTTPGFWPG
VDQAPVLEYFHLTSHGHRTEMQRQIREAASGLLQGGPALGHALEWTLENVLLTAVLPRRS
RVLYAIVASETSIWDREKLRTLSQEAKCKGIALFVLAVGPGVGAQELAELAKVASAPWEQ
HLLRLEGVSEAEVAYASRFTEAFLNLLNSGINQYPPPELVKECGGPNRGDTLLHFFTSAK
RFSRSQSGTSAAFANDSEALKSQGIFLGERKSRVASVALQEALGSHGKDRADTEDIDQET
PAKGRHLGPTHGPCPMGPEEGECLNYVLK
NT seq 6930 nt   +upstreamnt  +downstreamnt
atgggaacttggaagacattttggttgatcatctcccttgcagctggtttgggcttcgtc
aagtcacagaggattgtctgcagggaggcgtctgtgggagacattgtgtttctggtccac
aacagcatcaatccccagcatgcccacagtgtgcggaacttcttgtacatattggcaaac
agtttgcaagttggcagagacaacatccgtgtgggtctggcccagtacagcgatacaccc
acttctgagttcctgctttcagtttatcaccgcaaaggcgatgtgttgaaacacatccgt
ggacttcagtttaagcctggaggcaacaggatgggccaggccctgcagttcatcttagag
catcacttccgggaaggagccgggagccgggcaagccaaggggtgcctcaggtggccgtg
gtggtgagcagcggtctaacagaggaccacattcgcgaacctgcggaggctctcaggaga
gcgggaatcttggtatacgctattggggtcaaagacgcatctcaggctgaactcagggag
atttcgagtagtcccaaggataacttcaccttttttgttcccaacttccctggcttgcct
ggccttgcccagaagctgcggccagagctctgcagtactctagggaaggcagctcaatat
actgagcgggagtctccagcgtgctcagaagcatccccggctgacattgtgtttttggtg
gacagttcaactagcatcggactccagaacttccagaaagtgaagcatttcctccactct
gttgtctcggggctcgacgtcagaagcgatcaggtgcaagtggggctggtccagtacagt
gacaacatttacccagcctttccgctgaagcagtcctctctgaagagcgccgtcctggat
cggatccggaatctgccctacagcatggggggcacaagtaccggaagcgccctggagttc
atcagggccaactccttgactgagatgagtggcagccgtgccaaggatggggttcctcag
atagttgtcctggtgacagatggggagtccagtgatgaggtccaggatgtggctgaccag
ctgaaaagagacggggtctttgtgtttgtggtagggatcaatattcaagatgtccaagag
ttgcagaaaatagccaacgagccgtttgaggagtttctcttcaccacagaaaacttcagc
atcttgcaggcgctctcaggaaccctccttcaggccctgtgttccacggtggagaggcag
atgaaaaagtctaccaagacctacgcagacgtggtctttcttattgacacctcccagggg
acatcacaggctagtttccagtggatgcagaatttcatctctagaattattggcatcctg
gaggtcggccaggacaaataccagattgggctggctcagtatagcgatcaaggtcacact
gagtttttgttcaatacccacaagacccggaatgagatggtcgcacacatccatgaactc
ttggtgttccaaggtggctccaggaagactggccaaggccttcggtttcttcatcggact
ttcttccaggaggcagcaggaagccggctcttacagggtgtccctcagtatgtggtagtc
attacttcagggaaatctgaggacgaggtcggagaggtcgcacagatcctgaggaagaga
ggcgtggacatcgtgtctgtgggcttgcaggactttgacagggcagaactggaggggata
gggcctgtagtgcttgtgtctgacctgcagggagaagatagaatcagacagctaatgctg
gatgtgaatatgttcatccaggggagtccaaagcctccacgggtcatgactgatgttgcg
aaggacgctgtagaagaatgtctagttcccgttccagccgacctggtgttccttgttgag
gactttagcagtgccaggcaacccaatttccagcgagttgtccatttcttgacgaccact
gtccactctctcaacatccatcctgataccacaagagtcagcttggtcttttacagtgag
aaaccaaggctggagttttccctggatatgtatcaaagcgctgcccaagtcttacgccat
ctggacaggttaactttccgagcaagaagaggaagggcgaaggcaggtgctgctttagac
ttcctgaggaaagaagttttccttccagagaagggcagccggccccatcggggcgtacag
cagatagctgtggtcatcatagaaagtccttctctagacaatgtgtctacacctgcttcc
taccttcgcagggcgggggtcaccatctatgcagcgggcacccagcctgcctctgagagt
aaggacctggagaagattgtcacataccctccctggaagcacgccatccgcctagagtcc
tttctgcaactcagtgttgtaggaaacaaacttaaaaagaagctctgccctgagatgttg
agcggaatgcctcctctgatgagctttattccagaaagcacacgacaaagcacacaggaa
ggctgcgagagtgtggagaaggcagacatttacttccttattgatggatctggcagcatc
aaacccaacgacttcattgaaatgaaggacttcatgaaggaggtgataaagatgttccac
attgggcccgacagagtacgatttggagtcgttcagtactcagacaaaattataagccag
tttttcctcacccagtatgccagcatggcaggactgagcgcagccattgacaacatccaa
caggtgggaggtggtaccaccactggcaaggccttaagcaaaatggtaccagtcttccaa
aacactgccagaatcgacgttgcccgatacctcattgtcatcactgatggtcagtctacc
gacccggtggctgaggctgcgcagggattgagggacatcggagtcaatatttatgccatt
ggagtaagggatgctaatacgactgagcttgaggaaatagcaagcaaaaagatgtttttc
atatatgagtttgattccttgaagtccatccaccaggaagtcattcgggacatctgctcc
tcagagaactgtaagagccagaaagctgacatcatcttcttgattgatggctcagaatcc
atcgctcctaaagactttgaaaagatgaaggacttcatggagaggatggtgaaccagtct
aatatcggtgctgatgaaattcagattggccttctgcagttcagctccaatccccaggaa
gaattcaggcttaaccggtactcctcaaaggtggacatgtgcagagccatcttgagtgtc
caacagatgagtgatggtacccatactgggaaagccttgaatttcactctgccctttttt
gacagttcaagaggagggagacccagagttcatcagtatttgattgtgatcaccgacggg
gtctcccaggataatgtagctcccccagccaaagccctcagggacagaaacataattatt
tttgctatcggggtgggaaatgttcaaagagcccagcttttggagatcaccaatgaccag
gacaaagtattccaggaggaaaattttgagtccctgcagagcctggaaaaggaaattctt
tctgaggtctgtagttcccaaggctgcaacatagatctgtctgtaggagttgatacctca
acctcttcagagcgagctcagcaggagcttcgaaggttgctgccggagctgatgcaacag
ctggcttttctctctaacatcagctgtgaggctcctggccagatggagccgaggttccga
tatgtggttccaggctccagcgaccagcctgtctttgattccggctttgagaaatacagc
gatgagaccatccagaagttcttggtgcatcagggttctgtaaacaaccgtatggatgta
gactttctgcagtccctgggagagactgccattcacctgtctcttgctaaagtgaaggtc
cttttagtgtttacagacggacttgatgaagacctagagaggctgaggagaacctcagag
ttccttcgcagcagagggctctccggactgctgctcatcggcctgggaggtgcacataag
ttagaagagctgcaggagctggagtttggcagagggtttgcctacaggcagcctctgagc
tccagtctgccatccctcccaagcgtcttactgaagcaactcgacacaattgtggagagg
acatgctgtaacatgtatgccaaatgttacggagacgatgggatcagaggtgaacctggg
agtcgaggggagcagggagagaggggtttggacgggctccctggccatcctggtgaagag
ggagaccacggacaaagaggcccccgaggtcttcctggacttcgaggtgaggaaggatgt
ccaggtgtgagaggacctaagggagcaagaggattttcaggagagaagggcaaccctggt
gaggaaggtgttgggggcttggatggagaacagggcgatcgtggagccgcagggccatct
ggagagaaaggaagcagcggcagtcggggcttgacaggtctgcctggaccagctggacct
cgtggggagcctgggctgaggggagatccgggggatcctggaattgataatctcatccaa
ggccccaagggagaaaagggaaggcgtggacatcagggaagccctggtttccatggacct
ctgggggaagccggcagtgtgggacctcgggggtcacttggaagacatggcttgccaggg
ttgaagggtgtgcttggagaaaccggtgagctgggttcccgaggagagcctgggcatcca
ggcccacagggacccagaggaaggcaaggaccaccaggatttttcggtcaaaaaggggat
ccgggtacccaggggaatcctgggcttccagggccaagtggctcaaaaggaccagatgga
cccagaggactgaagggagaagtcggtcctgcaggagaaagaggtccacggggtcagcaa
ggcccaagagggcagcctggtcttttcggtccagacggccatggttatccgggaagaaaa
ggcaggaagggtgaacctgggttccctggctatcctggtgtgcaaggagaagatggtaac
ccaggccgtggaggagagaagggggccaagggaatccgagggaagaggggcaattctgga
tttcctgggcttgctggaactccaggtgaccaaggcccaccgggaaaaatgggcaccaaa
ggctcgaaaggcttggcagataggacgccttgtgaaattgttgacttcgtgcgaggaaac
tgcccttgctcaacaggtatttccaggtgcccagcattcccaacagaagtggtcttcacc
ttggacatgtccaacgatgtcgccccatcagactttgagaggatgagaaacattttatta
tctctgctgatgaagctggaaatgtgcgagagcaactgtcccactggtgcccgagtggcc
attgtttcctacaacacgaggacagattacctagtgcgcttgtcagaccatcggggaaaa
gctgcccttctgcaggctgtcaggaaaatccccctggaacgctcatctgggtctcggaac
cttggggccactatgaggtttgtggctagacacgtattcaaacgtgtacgctcaggcctt
ctggtgaggaaggtggccgtgttcttccaggcaggtaggaactatgacacagcctctgtc
agcacagccacgttggagctccacgcagcggacattgctacagcagttgtgaccttcaca
gaggagcacaacctcccagaggcagggctggtggatggacccaacgaatttcacctgttt
acgtgggagaccgagggccagcaggatgtggaacgcctggccagctgtactctctgctat
gacaagtgccgaccagccctggggtgccagctgcgtgctcctgggcctcagaagttggac
atggacttggtattcctggtggacagctcccagggtgtcagcagggacatataccttggg
gctttgcggctagtggattcagtgctcaaggacctggaggtggctgcgcagcctggcaca
tcctggcacggggcgcgcgcagccctgttgacacacacaaccccaggcttttggcctggt
gtggatcaagcccctgtgcttgagtacttccacctgacctcccacggccaccggacagaa
atgcaaaggcagattcgggaggctgcgagtggcctgctacagggaggccccgccctgggc
cacgccctggagtggacgctggaaaacgtgcttctgacagccgtactgcctcggaggtca
cgggtcctctatgccatcgtggccagcgagacaagcatctgggacagagagaagctaagg
actctgtcccaggaggccaagtgcaagggcatcgcattattcgtgctcgccgtgggccct
ggagtgggcgcccaggagctggctgagctggccaaagtggccagtgcgccctgggagcag
cacctgctacgcctagagggtgtctcagaggcagaggtggcctatgccagcagattcacg
gaggccttcctgaaccttctaaatagtggaataaaccagtatccacccccagagcttgtt
aaggagtgtggaggcccaaaccgtggggacaccttgctgcatttcttcacttctgccaag
aggttttccaggagccagtctggcacgtctgctgcctttgcgaatgactcagaagcactc
aagtcacagggcatctttctaggggagaggaaaagcagggtggcgtccgtagctctgcaa
gaagcgttgggaagtcatgggaaggacagggcggacactgaagacattgatcaggaaacg
ccagcaaaaggaagacatttgggccccacccacggtccttgtcccatgggtcctgaggaa
ggcgagtgcctgaattatgtcttgaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (94)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (86)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (16)   
   RefSeq(nuc) (4)   
   GenBank (6)   
   EMBL (6)   
Protein domain (6)   
   Pfam (6)   
All databases (133)   

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