KEGG   Mus musculus (house mouse): 68925
Entry
68925             CDS       T01002                                 
Symbol
Rpap1, 1190005L06Rik, A730023M06Rik, mKIAA1403
Name
(RefSeq) RNA polymerase II associated protein 1
  KO
K20826  RNA polymerase II-associated protein 1
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    68925 (Rpap1)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     68925 (Rpap1)
SSDB
Motif
Pfam: RPAP1_C RPAP1_N CEP104-like_TOG
Other DBs
NCBI-GeneID: 68925
NCBI-ProteinID: NP_001157173
MGI: 1916175
Ensembl: ENSMUSG00000034032
UniProt: Q80TE0
Position
2:complement(119594440..119618018)
AA seq 1409 aa
MMLSRPKPGESEVDLLRFQSQFLEAGAAPAVQLVKGSRRHGDAPPDRLPPQDHRDVVMLD
NLPDLPPALLPAPAKRARPSPGHPLPHDEDPEERLNRHDQHITAVLSKIVERDTSSVTVT
LPVPSGVAFPPVFHRSQERQVKPAASGKRSIFAQEIAARRVSGNRVTSAEQVVPSLDTPE
GAVPCETPSFRDRSNQLPGRSHGFHRPNLVTGKGLRSKVAEQEVQTIHEENVARLQAMDP
EEILKEQQQLLAQLDPSLVAFLRSHSQVQEQTGTKATKKQSPKRPSVLVTKEEPVTSTRT
REPRTGDKLEEKPEATVEDKMEDKLQPRTPALKLPMTPSKDWLHMDTVELDKLHWTQDLP
PLRRQQTQERMQARFSLQGELLAPDVDLPTHLGLHHHGEEAERAGYSLQELFHLTRSQVS
QQRALALQVLSQIVGRAQAGEFGDRLVGSVLRLLLDAGFLFLLRFSLDDRVDSVIAAAVR
ALRTLLVAPGDEELLDRTFSWYHGASVFPLMPSQDDKEDEDEDEELETEKVKRKTPEEGS
RPPPDLARHDVIKGLLATNLLPRLRYVLEVTCPGPSVILDILAVLIRLARHSLESAMRVL
ECPRLMETIVQEFLPTSWSPIGVGPTPSLYKVPCASAMKLLRVLASAGRNIAARLLSGFD
VRSRLCRFIAEAPHDLALPPEEAEILTTEAFRLWAVAASYGQGGDLYRELYPVLLRALQT
LPTELSAHPLQPLAMQRVAALFTLLTQLTLAASSIPPEPASGPAESCVPAIPSSVTWTQV
SGLKPLVEPCLKQTLKFLPRPDVWNALGPVPSACLLFLGAYYQAWSRQSHLCPEDWLQDM
ERLLDESLLPLLSQPPLGSLWDSLRDCSPLCNPLSCASNPEALPSLVSLGCAGGCPPLSV
AGSASPFPFLTALLSLINTLVQSHKGLCGQLSAVLTAPGLQNYFLQCVAPAPAPQLTPFS
AWALHHEYHLQYLVLSFAHKAATLQPEPAASTALHHAVALVLLSRLLPGSEYLAQELLLS
CVFRLEFLPESASGGPEAADFSDGLSLGSSGDPQCRRGALLVQACRDLPSIRSCYLAHCS
PARASLLSSQALYCGELLRVSSLLLPVPKEPLLATDWPFQPLIHLYHRASDTPSGPPAAD
TVGVAMRVLQWVLVLESWRPEVLWAVPPAARLARLMCVYLVDSELFRETPIQRLVAALLA
RLCRPQVLPNLKLDCPLPGLTSFPDLYASFLDHFEAVSFGDHLFGALVLLPLQRRFSVTL
RLALFGEHVGVLRALGLPLTQLPVPLECYTEPAEDSLPLLQLYFRALVTGTLRARWCPIL
YTVAVAHVNSFIFCQDPKSSDEVKTARRSMLQRTWLLTDEGLRQHLLHYKLPNSSLPEGF
ELYSQLPRLRQQCLQTLPTEGLQNGGVKT
NT seq 4230 nt   +upstreamnt  +downstreamnt
atgatgctgtccagaccgaagcctggagagtcagaggtggacctgctgcgcttccagagc
cagttccttgaggctggtgcagccccggcggtgcagctggtgaaggggagtaggaggcat
ggtgatgctcctccagaccggctcccaccgcaggaccatcgggatgtggtgatgctggac
aatctcccagatttgcccccagctctgcttcccgctcctgcaaaaagagcaagaccgagc
cctggtcacccgctgcctcacgatgaagaccctgaagagaggctgaacaggcatgatcag
cacatcactgctgtcttgtctaagattgttgaacgagatacaagttcagtcactgtgact
ctgcctgtgcccagtggtgttgctttcccgcctgtgttccatcgctctcaggagagacag
gtgaaaccagcagcatctggtaaaaggagcatctttgcccaagagattgcagcaagaagg
gtgtcaggaaacagggtgacatcagctgagcaagttgtccccagcctagacacaccagag
ggtgctgtgccctgtgagacaccctccttcagggacagaagcaaccagcttcctgggagg
agtcatggcttccacagaccaaatctagtcacaggaaaggggctcaggagcaaggtggct
gagcaggaggtccagacaatccatgaagagaatgtagcaagactacaagccatggatcct
gaggagatcctgaaggagcagcagcagttactggctcaactcgaccccagcttggttgcc
ttcttgagatctcatagccaggtccaggaacaaacaggaacaaaggccaccaagaagcag
agtccaaagagaccctcagttcttgtcactaaagaagagcctgtcacgtcaactcgtaca
agggagcctaggactggggacaagctggaagaaaagccggaggccacggtggaggacaag
atggaagacaagctgcagccaagaaccccagcactgaaactgcccatgacccccagcaaa
gactggctccacatggacaccgtagagctggacaagctccactggacccaggacctgccc
ccactccggcggcagcagacacaggagagaatgcaggctcgattcagccttcagggcgag
ctcctggcgcctgatgtggatcttcccacacatctgggcctgcaccaccacggagaagag
gccgagcgagcagggtattctctacaggagctgttccacctgacccgtagccaggtgtcc
cagcagagagcactagcattgcaagtgttgtcccagatcgtcggcagggcccaggctggt
gagtttggggaccgcctagtgggcagtgtcttgcgcctcctcttggatgctggtttcctc
ttcctgctgcgcttctctctggatgacagggtggacagtgtcatcgcagcagctgtccgg
gctcttcgtactctgctagtggctcctggagatgaggagctcctggaccgcaccttctct
tggtatcatggagcttcggtgttccctctgatgcccagccaggacgataaagaggatgaa
gatgaagatgaggaactcgaaacagaaaaggtgaagagaaagacacctgaggaaggaagc
cgccctcccccggacctggccagacatgatgtcatcaaggggctcctggctaccaacctg
cttcctcggctccgctatgtgctggaggtgacctgcccaggaccctctgtgatccttgac
atcctggctgtgcttatccgcctggcccggcattccctggagtcggccatgagggtcctg
gagtgtcctcggctgatggagaccatagttcaagagttcctgcctaccagttggtcccct
ataggggtggggcctactcccagtctatataaagtgccttgtgcttctgccatgaaactg
cttagagtcctggcttcagctgggaggaatattgctgctcgactgctaagcggctttgat
gtcaggagccgcctgtgccgattcatagctgaagcgccacatgacctggccttgcccccc
gaggaagcagagattctgaccactgaggccttccgtctgtgggccgtggctgcctcctat
ggccagggtggtgacctttacagggagctgtacccagtgctgctgcgggccttgcagaca
ctgcctacagagctcagcgctcatcccctacagcccctggccatgcagcgggtggccgct
ctgttcacactgcttacccagctcaccctggcagctagcagcatacctcctgagcccgcc
agtggccctgctgagtcctgtgtgccggccatcccttcctcagtcacctggacacaggtg
tctggactcaagccactggtggagccatgtctaaagcagaccctaaagttcctgcccagg
ccggatgtgtggaatgccctgggcccagtgcccagtgcctgccttctgttcttgggtgct
tactatcaggcctggagccggcagtcacacttgtgcccagaagattggcttcaggacatg
gagcgcttgttggatgagtccttgctgccactgctgagccagcctcctctgggcagtctg
tgggattccttaagggactgctccccactctgcaatccgctgtcctgtgcttccaacccg
gaagccctccccagccttgtgtcactgggctgtgcaggaggctgtccccctctcagtgtg
gctggctcagcctcacccttcccgttcctcactgccctcctctccctcatcaacactctg
gtccagagccacaaggggctctgtggacagctgtctgctgtgttgactgccccaggactc
cagaactactttctccagtgtgtggctcctgcgcctgccccacagctcacacccttctct
gcctgggccctgcaccatgagtaccacctacagtatctggtgctttccttcgcccacaaa
gcggcaacactgcagccagaaccagctgccagcactgccctccaccatgctgtagccttg
gtcctgctgagccggctgttgcctggaagcgaataccttgcccaggagctgctgctgagc
tgtgtgttccggctggagttcctgccggaaagtgcttcagggggcccagaggcagctgac
ttctccgatggactgtccttagggagcagtggggaccctcagtgtagacgaggggccctc
ctcgttcaagcttgccgggatctccccagcatccgcagctgctacctggcccattgttca
ccagcccgagccagtctgctgagctcccaagccttgtactgtggagagctactgcgagtc
tcaagtctgctactgcctgtacctaaggagccactgctggccactgactggcccttccag
ccgttgatacatctctaccaccgagcttcagatactccctctgggccacctgctgctgac
actgtaggcgttgccatgcgggtcctacaatgggtgctagttctggagagctggcgcccc
gaggtcctctgggctgtgccccctgctgcccgcctagcacgtctcatgtgtgtgtacctg
gtggatagcgagctgtttcgagagactcccatacagcgactggtggcagctcttttagct
cggctctgtcggccccaagtcttgccaaacctcaagctggactgccccctccctggcctg
acctcttttcctgacctttatgccagcttcttagaccattttgaggctgtctcttttggg
gaccacttgtttggggccctggtcctccttcctctgcagcgtaggttcagtgttaccttg
cgcctcgccctctttggggagcacgtgggagtgttgcgagcacttggcctgcctctgact
cagctgcctgtgcctctggagtgctacacagagcctgctgaagacagcctgcctctcctt
cagctctacttccgggccttggttactggtacactccgtgcacgttggtgccccatcctc
tacactgtagccgtggctcatgtcaacagtttcatcttctgccaagacccaaagagctca
gatgaggtaaagactgcccgaaggagtatgctgcagagaacgtggctgctgacagatgag
gggctgcggcagcatctcctccactataagcttcccaactccagcctcccagagggcttt
gagctgtattcccagttacctcgcctgaggcagcagtgccttcagacactgcccacagag
gggctccagaatggaggagtcaagacatag

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (62)   
   RefSeq(nuc) (6)   
   GenBank (28)   
   EMBL (28)   
Protein domain (3)   
   Pfam (3)   
All databases (110)   

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