KEGG   Mus musculus (house mouse): 69241
Entry
69241             CDS       T01002                                 
Symbol
Polr2d, 2310002G05Rik, 2610028L19Rik, HSRBP4, RBP4
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide D
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03020  RNA polymerase
mmu03420  Nucleotide excision repair
mmu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    69241 (Polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    69241 (Polr2d)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    69241 (Polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    69241 (Polr2d)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    69241 (Polr2d)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     69241 (Polr2d)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      69241 (Polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 69241
NCBI-ProteinID: NP_081278
MGI: 1916491
Ensembl: ENSMUSG00000024258
UniProt: Q9D7M8
Position
18:31922178..31929762
AA seq 142 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggcgggtggaagcgatcctcgggctggcgacgtagaagaagacgcttcccagctt
atctttcccaaagagtttgagacagcggagactctgctgaactcggaagtccacatgctt
ctggagcatcgaaagcagcagaacgagagcgcggaggacgagcaggagctgtcggaggtc
ttcatgaaaaccctcaactacacggcccgcttcagccggttcaaaaacagagagaccatt
gccagtgtgcgcagcttgcttctccagaaaaagttacataagtttgagttggcctgttta
gccaatctttgcccggagactgctgaagagtccaaagctctgattccaagcctggaaggg
cgttttgaagatgaggagctgcagcagattctcgatgacatccagacgaagcgcagcttc
cagtactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (14)   
   RefSeq(nuc) (2)   
   GenBank (6)   
   EMBL (6)   
Protein domain (3)   
   Pfam (3)   
All databases (43)   

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