KEGG   Mus musculus (house mouse): 70052
Entry
70052             CDS       T01002                                 
Symbol
Prpf4, 1600015H11Rik, bN189G18.1
Name
(RefSeq) pre-mRNA processing factor 4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    70052 (Prpf4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    70052 (Prpf4)
Spliceosome [BR:mmu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    70052 (Prpf4)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 PRP4 NBCH_WD40 WD40_like Ge1_WD40
Other DBs
NCBI-GeneID: 70052
NCBI-ProteinID: NP_081573
MGI: 1917302
Ensembl: ENSMUSG00000066148
UniProt: Q9DAW6 Q059T9
Position
4:62327002..62345227
AA seq 521 aa
MASSRASSTTTKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggcctcctcacgagcctcctccacgacaaccaaaaccaaagcgcctgacgatttagtt
gctcccgttgtgaagaaaccacacatctactatggaagcttggaagagaaagagcgggaa
cgcctggccaaaggagagtctgggattttgggaaaagaaggactcaaagccggcattgaa
gcaggaaatattaatataacatccggagaagtgtttgaaattgaggagcacatcagtgag
cggcaggcagaagtcttggcagagtttgaaagaagaaagcgagcccggcagatcaatgtt
tccacagatgactcagaggtcaaggcttgccttcgagccttgggagagcctatcacgctt
tttggagagggccctgctgaacgaagagaaaggttaagaaatattctctcagtggtcggg
actgatgccttaaaaaagacgaaaaaagatgatgaaaagtctaagaagtcaaaggaggag
tatcagcaaacctggtaccatgaagggccaaatagcctgaaggtggccagattgtggatt
gctaattattcactccccagggcaatgaaacgcttagaggaggcccgtctccataaggag
attcctgagacaaccagaacctcccagatgcaggagctgcacaagtctctccggtctttg
aataatttctgcagtcagattggagatgaccggccgatctcctactgccacttcagcccc
aattctaaaatgctagccacagcttgttggagtgggctttgcaagctctggtctgtccct
gactgcagcctccttcacactcttcgaggccataacacaaatgtaggagcaattgtattc
catcccaaatccactgtctcgttggaccagaaggatgtcaacctggcctcttgtgctgct
gatggttctgtgaagctttggagccttgacagcgatgaaccagtggcagatattgaaggc
catacagtgcgtgtagctcgggtaatgtggcatccatcagggcgtttcctgggcacaacc
tgttatgaccgttcatggcgcttatgggatttagaggctcaagaggagatcctgcaccag
gaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggc
actgggggactggatgcatttggccgggtttgggacctacgcacaggacgctgcattatg
ttcctggaaggccacctgaaggaaatctatgggataaatttcagccccaatggctaccac
attgccactggcagtggtgacaacacctgcaaagtgtgggaccttcggcagcgacgctgt
gtctacaccatccccgcccatcagaacttagtgaccggtgtcaaatttgagcctatccat
ggggacttcttgctcacaggtgcctatgacaatacagccaagatctggacccacccaggc
tggtccccactgaagaccctggctggtcatgagggcaaagtgatgggcctggacatttct
tctgatgggcagctcatagccacgtgctcctatgacagaaccttcaagctctggatggca
gagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (30)   
   RefSeq(nuc) (4)   
   GenBank (13)   
   EMBL (13)   
Protein domain (6)   
   Pfam (6)   
All databases (66)   

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