KEGG   Mus musculus (house mouse): 70673
Entry
70673             CDS       T01002                                 
Symbol
Prdm16, 5730557K01Rik, csp1, mel1
Name
(RefSeq) PR domain containing 16
  KO
K22410  [histone H3]-lysine9 N-methyltransferase [EC:2.1.1.367]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu00310  Lysine degradation
mmu01100  Metabolic pathways
mmu04714  Thermogenesis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    70673 (Prdm16)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    70673 (Prdm16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    70673 (Prdm16)
   03036 Chromosome and associated proteins [BR:mmu03036]
    70673 (Prdm16)
Enzymes [BR:mmu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.367  [histone H3]-lysine9 N-methyltransferase
     70673 (Prdm16)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    70673 (Prdm16)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     70673 (Prdm16)
SSDB
Motif
Pfam: zf-C2H2 zf-H2C2_2 zf-C2H2_4 PRDM2_PR SET zf-C2H2_6 zf-C2H2_jaz zf-C2H2_11 zf-H2C2_5 zf-BED Zap1_zf1
Other DBs
NCBI-GeneID: 70673
NCBI-ProteinID: NP_081780
MGI: 1917923
Ensembl: ENSMUSG00000039410
UniProt: A2A935
Position
4:complement(154400579..154721851)
AA seq 1275 aa
MRSKARARKLAKSDGDVVNNMYEPDPDLLAGQSAEEETEDGILSPIPMGPPSPFPTSEDF
TPKEGSPYEAPVYIPEDIPIPPDFELRESSIPGAGLGIWAKRKMEIGERFGPYVVTPRAA
LKEADFGWEMLTDTEVSSQESCIKKQISEDLGSEKFCVDANQAGSGSWLKYIRVACSCDD
QNLAMCQINEQIYYKVIKDIEPGEELLVHVKEGAYSLGVMAPSLDEDPTFRCDECDELFQ
CRLDLRRHKKYACSSAGAQLYEGLGEELKPEGLGVGSDGQAHECKDCERMFPNKYSLEQH
MIVHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQ
HVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADC
RTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGSIFTPGLPLTPSPMMDKTKPSPTLN
HGGLGFSEYFPSRPHPGSLPFSAAPPAFPALTPGFPGIFPPSLYPRPPLLPPTPLLKSPL
NHAQDAKLPSPLGNPALPLVSAVSNSSQGATAATGSEEKFDGRLEDAYAEKVKNRSPDMS
DGSDFEDINTTTGTDLDTTTGTGSDLDSDLDSDRDKGKDKGKPVESKPEFGGASVPPGAM
NSVAEVPAFYSQHSFFPPPEEQLLTASGAAGDSIKAIASIAEKYFGPGFMSMQEKKLGSL
PYHSVFPFQFLPNFPHSLYPFTDRALAHNLLVKAEPKSPRDALKVGGPSAECPFDLTTKP
KEAKPALLAPKVPLIPSSGEEQPLDLSIGSRARASQNGGGREPRKNHVYGERKPGVSEGL
PKVCPAQLPQQPSLHYAKPSPFFMDPIYRVEKRKVADPVGVLKEKYLRPSPLLFHPQMSA
IETMTEKLESFAAMKADSGSSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIF
PRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQ
TNLDRHLKKHEHEGAPVSQHSGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFI
ANSEMNQASTRMDKRPEIQDLDSNPPCPGSASAKPEDVEEEEEEELEEEDDDSLAGKSQE
DTVSPTPEPQGVYEDEEDEEPPSLTMGFDHTRRCVEERGGGLLALEPTPTFGKGLDLRRA
AEEAFEVKDVLNSTLDSEVLKQTLYRQAKNQAYAMMLSLSEDTPLHAPSQSSLDAWLNIT
GPSSESGAFNPINHL
NT seq 3828 nt   +upstreamnt  +downstreamnt
atgcgatccaaggcgagggcgaggaagctagccaaaagtgacggtgacgttgtaaataat
atgtatgaacctgacccggacctgctggccggccagagtgccgaggaggagaccgaagac
ggcatcctgtcccccatccccatggggccaccgtcccccttccccaccagcgaggacttc
actcccaaggagggctcgccctatgaggctcctgtctacattcctgaagacattccaatc
ccaccagacttcgagctacgagagtcctccataccaggagctggcctggggatctgggcc
aagcggaagatggaaatcggggagaggtttggcccctacgtggtgacgccccgggccgca
ctgaaggaggccgactttggatgggagatgctgacggatacagaggtgtcatcccaggag
agctgcatcaaaaagcagatctctgaagacttgggtagcgagaagttctgcgtggatgcc
aatcaggcggggtctggcagctggctcaagtacatccgtgtagcgtgttcctgtgatgac
caaaacctcgccatgtgtcagatcaacgaacagatttactataaagtcattaaggacatc
gagcctggagaggaactgttggtgcatgtgaaagaaggtgcctactccttgggtgtcatg
gcccccagcttggatgaggaccccacattccgctgtgatgagtgtgatgagctcttccag
tgcaggctggacctgaggcgccacaagaagtacgcgtgcagctctgcaggagcccagctc
tacgagggcctaggggaggaactcaagcccgagggccttggcgtgggcagcgacgggcaa
gcgcatgagtgcaaggattgcgagcggatgttccccaacaagtacagcttggagcaacac
atgatcgtccacacggaagagcgtgagtacaaatgtgaccagtgtcccaaggccttcaac
tggaagtccaacctcatccgccaccagatgtctcacgacagtggcaagcgcttcgaatgt
gaaaactgtgtcaaggtgttcacggaccccagcaacctccagcgtcacatccgctcacag
catgtcggtgcccgggcccatgcctgccctgactgtggcaagaccttcgccacatcctct
ggcctcaaacagcacaagcatatccacagcacggtgaagccattcatatgcgaggtctgc
cacaagtcctacacgcagttctccaacctgtgccggcacaagcggatgcacgccgactgc
aggacgcagatcaagtgcaaggactgtgggcagatgttcagcactacctcctccctcaac
aagcatcggagattctgcgagggcaagaaccattacacgcctggcagcatcttcacccca
ggcctgcccttgacccccagccccatgatggacaagacaaaaccctccccgaccctcaac
cacgggggcctaggcttcagcgagtacttcccctccagacctcatcctgggagcctgccc
ttctcggctgctcctccggccttccccgcactcactccgggcttcccgggcatctttcct
ccatccctgtacccacgaccacctctgctacctcccacgccgctgctcaagagccccctg
aaccacgcgcaggacgccaagctacccagcccgctgggaaacccagccctgccccttgtc
tccgcggtcagcaatagcagccagggtgccacagcggccaccgggtcagaggagaaattt
gatggccgcttggaagacgcatatgcggagaaggtcaaaaataggagccctgacatgtcg
gatggcagtgactttgaggatatcaacaccacgaccgggacagacttggacactaccacg
ggcacggggtcagacctggacagcgacctggacagtgacagagacaaaggcaaggacaag
gggaagccagtggagagcaaacctgagtttgggggtgcatctgtgccccctggggccatg
aacagtgtggccgaggtaccggccttctactcacagcattccttcttcccgccacccgag
gaacagctgctgacggcctcgggagctgccggcgactccatcaaggccatcgcgtccatc
gcggagaaatacttcggtcctggcttcatgagcatgcaggagaagaagctgggctcacta
ccctaccactccgtgttccccttccagttcctgcctaactttccccactccctctacccc
tttacggaccgagccctcgcccacaacttgctggtcaaggctgagccaaagtcaccccgg
gatgccctcaaggtgggcggccccagtgcggagtgccccttcgacctcaccaccaaacca
aaagaggccaaacccgccctgctcgcacccaaggtccccctcatcccctcatctggcgag
gaacagccactggacctgagcatcggcagcagggccagggcaagccagaacggaggtggc
cgtgagccgcggaagaaccacgtctacggtgaacggaagccgggggtcagcgaggggctg
cctaaggtgtgcccagcacagctgccccagcagccctccttgcattatgctaagccttca
ccgttcttcatggatcccatctacagggtagaaaagcggaaggtggcagaccctgtggga
gtcctgaaagagaagtacctgcggccgtccccacttctgttccacccccagatgtcagcc
atagaaaccatgacggagaagctggagagctttgcagccatgaaggccgactcaggcagc
tccctgcagcccctgcctcaccacccgttcaacttccgctccccacccccaacgctctcg
gatcccatcctcaggaaggggaaggagagatacacgtgcaggtactgtggcaagatcttc
cccagatctgcaaatctcacaagacatctgaggacacacacaggggagcagccatacagg
tgcaagtactgtgaccggtcattcagcatctcctccaacctccagcggcacgtgaggaac
atccacaacaaagagaagccgttcaagtgccatctgtgcaaccgctgcttcgggcagcag
accaacctagaccggcacctgaagaagcacgaacacgagggcgcaccagtgagccagcac
tccggggtgctcacgaaccacctgggcaccagcgcctcctcccccacctccgagtcggac
aaccatgcacttttagatgagaaggaagattcttacttctccgagatccgaaacttcatc
gccaacagcgagatgaaccaggcatccactcgaatggacaaacggcctgagatccaagac
ctggacagcaacccaccgtgtccaggctcagccagtgcaaagccagaggacgtagaggag
gaggaagaggaggagctggaggaagaggatgatgacagcttagccgggaagtcacaggag
gacacggtgtcccccacacctgagccccaaggagtctatgaagatgaagaggatgaggaa
ccacccagcctgaccatgggctttgaccatacccggaggtgtgttgaggagcgaggaggc
ggcctgttagctttggagccgacgccgacctttgggaaggggctggatctccgcagagca
gctgaggaagcatttgaagttaaagatgtgcttaattccaccttagattctgaggtttta
aaacaaaccctgtacaggcaggctaagaaccaggcatatgcaatgatgctgtccctctct
gaagacactcctctccacgccccctcccagagctcactggatgcttggttgaacatcaca
ggaccctcgtcagagtccggagcctttaaccccatcaaccacctctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (14)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (12)   
DNA sequence (36)   
   RefSeq(nuc) (12)   
   GenBank (12)   
   EMBL (12)   
Protein domain (11)   
   Pfam (11)   
All databases (103)   

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