KEGG   Mus musculus (house mouse): 71997
Entry
71997             CDS       T01002                                 
Symbol
Smg9, 1500002O20Rik
Name
(RefSeq) SMG9 nonsense mediated mRNA decay factor
  KO
K18735  protein SMG9
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    71997 (Smg9)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     71997 (Smg9)
SSDB
Motif
Pfam: Smg8_Smg9 AAA_30 DUF6079
Other DBs
NCBI-GeneID: 71997
NCBI-ProteinID: NP_082323
MGI: 1919247
Ensembl: ENSMUSG00000002210
UniProt: Q9DB90
Position
7:24099106..24122197
AA seq 520 aa
MSESGHSQPGLYGIERRRRWKEPGSSGPQNLSGPGGRERDYIAPWERERRDGSEDPSTNV
MQKTPIILSKPPAERSKQPPPSTAPAAPPAPAPLEKPIVLMKPREEGKGPVAGTGASTPE
GTAPPPPTAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPTAMDPVVGQAKLLPPERMKHS
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRAYVFRA
QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV
EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSAGSDEG
TEYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD
FLDAEVNLFLVPFMDSEAENENPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSM
ARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLLA
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgtcggagtctgggcacagtcagcctgggctctacgggatagagcggcggcggcggtgg
aaggagccaggctccagtggcccccagaacctttctggacctggtggtcgggagagagac
tacattgccccctgggaaagagagagacgggatggcagcgaagaccccagcactaacgtc
atgcagaaaacccccatcatcctctcaaagcccccagctgagcggtcaaagcagccgcca
cctagtacagcgccagctgcaccgccagccccggccccactggagaaacccattgtgctc
atgaagccacgtgaggaggggaaggggcctgtggctggaacaggggcttccacccctgaa
ggtactgcgcccccgccccccacggcccctgcaccacccaagggagagaaggaggggcag
agacccacacagcctgtgtaccagattcaaaaccggggcatgggcactgctgccccaact
gccatggaccctgtggtgggccaggctaagctcctgcccccagagcgcatgaagcacagc
atcaagctggtagacgaccagatgaactggtgtgacagtgccattgagtacctgctggat
cagacggacgtgttagtggtcggtgtcttaggcctccaggggacaggcaagtccatggtc
atgtcactgctgtctgcaaacactccagaggaagaccagagagcgtatgtcttccgggct
cagagtgcagagatgaaggaacgagggggcaaccagaccagtggcattgacttcttcatt
acccaagagcggattgtcttcctagacacacagcccatcctcagcccatccatcttggac
cacctcatcaataacgaccgcaaactgcctccagagtataacctccctcacacctatgtg
gaaatgcagtccctgcagatagctgccttcctcttcaccgtgtgccacgtggtgatcgtc
gtgcaggattggttcacggacctcagtctgtacaggttcctgcagacagcagagatggtg
aagccatccacaccgtcccccagccacgagtctagcagctctgcaggctcagacgagggt
accgagtactacccccacctggtcttcttgcagaacaaggcacgtagggaggacttctgt
ccccggaagctacgtcagatgcacctgatgattgaccagctcatggcacactcccacctg
cgctacaaggggacgctgtccatgctacagtgcaacgtcttcccagggctgccgcccgac
ttcctggatgctgaggtcaacttgttcctggtgcccttcatggacagtgaagctgagaac
gagaacccacctcgagcaggacctggctccagccccctcttttccctcctgcctgggtac
cgaggtcaccccagcttccagtccttggtcagcaagctccgcagccaggtgatgtctatg
gctcggccacagctgtcacacacgatcctcactgagaagaattggttccactacgctgcc
cgcatctgggatggggtgaagaagtcctcagccctggcagagtacagccgcctgctggcc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (18)   
   RefSeq(nuc) (4)   
   GenBank (7)   
   EMBL (7)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

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