KEGG   Mus musculus (house mouse): 72088
Entry
72088             CDS       T01002                                 
Symbol
Ush1c, 2010016F01Rik, harmonin
Name
(RefSeq) USH1 protein network component harmonin
  KO
K21877  harmonin
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mmu03037]
    72088 (Ush1c)
Cilium and associated proteins [BR:mmu03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   72088 (Ush1c)
SSDB
Motif
Pfam: USH1C_N PDZ PDZ_6 PDZ_2 Baculo_LEF5_C
Other DBs
NCBI-GeneID: 72088
NCBI-ProteinID: NP_710143
MGI: 1919338
Ensembl: ENSMUSG00000030838
UniProt: Q9ES64 E9QMN1
Structure
Position
7:complement(45844774..45887984)
AA seq 910 aa
MDRKVAREFRHKVDFLIENDAEKDYLYDVLRMYHQTMDVAVLVGDLKLVINEPNRLPLFD
AIRPLIPLKHQVEYDQLTPRRSRKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKG
GQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKTVSIKVRHIGLIPVKSSPEESL
KWQYVDQFVSESGGVRGGLGSPGNRTTKEKKVFISLVGSRGLGCSISSGPIQKPGIFVSH
VKPGSLSAEVGLETGDQIVEVNGIDFTNLDHKEAVNVLKSSRSLTISIVAGAGRELFMTD
RERLEEARQRELQRQELLMQKRLAMESNKILQEQQEMERQRRKEIAQKAAEENERYRKEM
EQISEEEEKFKKQWKEDWGSKEQLILPKTITAEVHPVPLRKPKSFGWFYRYDGKFPTIRK
KAKEKKKAKYDSLQDLRKNKKELEFEQKLYKEKEEMLEKEKQLKINRLAQEVSETEREDL
EESEKTQYWVERLCQTRLEQISSAENEIPEMTTGPPPPPPSVSPLAPPLRRFAGGIHLHT
TDLDDIPLDMFYYPPKTPSALPVMPHPPSVNPPSKVPAPPVLPSSGHVSSSSSPWVQRTP
PPIPIPPPPSIPTQDLTPTRPLPSALEEALGNHPFRTGDPGHPADDWEANTHSGKPSSSP
TTERSFPPAPKTFCPSPQPPRGPGVSTISKPVMVHQEHNFVYRPAVKSEVLPQEMLKRMV
VYQTAFRQDFRKYEEGFDPYSMFSPEQIAGKDVRLLRIKKEGSLDLALEGGVDSPVGKVV
VSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVC
PPKEYDDELSSLPSSAAESPQLARKQLEAYEPVCRHGFFLQLEPTNLLLKSRERNQTDPS
WRPASSAPSP
NT seq 2733 nt   +upstreamnt  +downstreamnt
atggaccggaaggtggcccgagaattccgacacaaggtggattttctcattgaaaatgac
gcagagaaggactatctttatgatgtgctgcggatgtatcaccagaccatggatgtggct
gtgctcgtgggagacctgaagctggtcatcaatgaacccaaccgcctgccgctgtttgat
gccattcgacccctgatcccactgaagcaccaggtggagtatgaccagctgacaccccga
cgctccaggaaactgaaggaggtacgcttggaccgtctgcacccagaaggtctcggcctc
agcgtgcgtggaggcctggaatttggctgtggactctttatctcccacctcatcaaaggt
ggccaggcagacagcgttgggcttcaggtaggggatgaaattgtccggatcaacggctat
tccatctcttcctgtacccatgaggaagtcatcaacctgatccgcaccaagaagaccgtg
tccatcaaagtgagacacatcggactgatccctgtgaagagctctcctgaggagtccctc
aaatggcagtatgtggatcagttcgtgtcggaatctgggggtgtgcgaggtggcttgggc
tcacctggcaatcggacaaccaaggagaagaaggtgtttatcagtctagtgggctctcgg
ggcctgggctgcagcatctccagtggccccatccagaagcctggcatcttcgtcagccac
gtgaagcctggctccctgtctgcagaggtggggttagagacaggagaccagattgtggaa
gtcaacggcatagacttcaccaacctggaccacaaggaggctgtgaatgtcctgaagagc
agccgcagcctgaccatctccatcgttgctggagccggccgggagctgttcatgacggac
cgggaacggctggaggaggcacggcagcgtgagctgcaacggcaggaactcctcatgcag
aagcggctggccatggagtccaacaagatcctccaggagcagcaggagatggagcgccag
aggagaaaggagatcgcccagaaggctgccgaggagaatgagagataccggaaggagatg
gaacagatctcggaggaggaagagaagtttaagaagcagtggaaagaagactggggttca
aaggagcagctcattctgcctaagaccatcaccgcagaggtgcacccggtgccccttcgc
aagcccaagtcttttgggtggttttaccgttacgatggcaaattcccaaccatccggaag
aaagcaaaagagaagaagaaagccaagtacgatagcctgcaggacctgaggaagaacaag
aaggaactcgagtttgaacaaaagctctacaaagagaaggaagagatgctggagaaggag
aagcagctcaagatcaaccggctggcccaggaggtgtctgagactgagcgggaagacctt
gaggaatcggaaaagactcagtattgggtggagaggctctgtcagacgcgcctcgagcag
atttcctctgcagagaatgagattcctgagatgaccacagggcccccacctcccccacct
tctgtgtctcctctggccccacccttgagacgattcgctggtgggatccacctccacacc
actgacctggatgacatccccttggacatgttctactacccccccaagactccctcagca
ctgcccgtgatgccccaccctccatctgtcaacccaccttccaaggtccccgcgccccct
gtgcttccctcatcaggtcacgtgagcagctcatcctcaccatgggtgcaacgcactcct
cccccaatccccattcctccgcctccatccattcccacccaagacctcactcctacccgc
ccattgccctcagcactggaagaggccctgggcaaccaccccttccgcactggggaccca
ggccatccagcagatgactgggaggcaaacacccacagtgggaagccctccagctccccc
accactgagcggagcttcccacctgccccaaagacattctgcccaagcccacagcctcca
cgaggccctggcgtgtccaccatctccaaacccgtcatggtccaccaggaacacaacttc
gtctacaggcctgctgtgaagtccgaggttctgccgcaggagatgctgaagaggatggtg
gtatatcagacagcattcagacaagattttcgaaaatacgaagaaggctttgatccctac
tccatgttctcgccagagcagatcgcagggaaggacgtccggcttctgcgaatcaagaag
gaggggtctttagacttggccctggagggaggcgtggactcccccgtggggaaggtggtc
gtctctgctgtttatgaagggggagctgcggagaggcatggtggcgttgtgaaaggggat
gagatcatggccatcaatggcaagattgtgacggactacaccctggctgaggccgaggct
gccctacagaaggcctggaatcagggcggggactggatagaccttgtggttgctgtctgt
ccccctaaggagtatgatgacgagctctcttctcttccctcctctgcagccgaaagcccc
cagctggcccgaaagcagcttgaagcctatgagcccgtgtgtagacacgggtttttcctg
cagctggagcccacgaaccttcttttaaagtccagagagagaaaccagacagacccatcc
tggaggccggcgagctccgcacccagcccctga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (22)   
   RefSeq(nuc) (6)   
   GenBank (8)   
   EMBL (8)   
3D Structure (1)   
   PDB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (76)   

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