KEGG   Mus musculus (house mouse): 72133
Entry
72133             CDS       T01002                                 
Symbol
Trub1, 2610009I02Rik, 9030425C13Rik
Name
(RefSeq) TruB pseudouridine (psi) synthase family member 1
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mmu03016]
    72133 (Trub1)
Enzymes [BR:mmu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     72133 (Trub1)
Transfer RNA biogenesis [BR:mmu03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    72133 (Trub1)
 Prokaryotic type
    72133 (Trub1)
SSDB
Motif
Pfam: TruB_N TruB_C_2 Pus10_C
Other DBs
NCBI-GeneID: 72133
NCBI-ProteinID: NP_082391
MGI: 1919383
Ensembl: ENSMUSG00000025086
UniProt: Q8C0D0
Position
19:57441323..57479437
AA seq 338 aa
MAAAEAEVVSPLIVDTAPDTSGTAEASVAASVAEAARTESQAPASKAALAAKLMSLSGVF
AVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWNKRQKQTLKVGHGGTLDSAAQGVLVVGI
GRGTKMLTSMLSGSKRYITIGELGKATDTLDSTGKVTEEKPYDKITREDIEGILQKFTGN
IMQVPPLYSALKKDGQRLSTLMKKGKVVEARPARPVTVHSISLLKFQPPFFTLDVECGGG
FYIRSLVSDIGKELSSCASVLELTRTKQGPFTLAQHALPEDRWTIDDIEQSLERCTSLLP
EELTFKKLKSDNSSDQVISCGYITLRDTKREDDAVKTL
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggcagctgcagaggcagaggtggtttcacctctgattgtggacacagctcctgacact
tcaggaacagccgaggcctctgtagcagcatcggtggcggaagcggccaggactgaatcg
caagccccggcctccaaggccgccctggctgctaagctcatgtcgctgagcggcgtgttc
gccgtgcacaagcccaaagggcccacttcagccgagctgctgaaccggctgaaggagaag
ctgctggcagaagctggaatgccttctccagaatggaacaagaggcaaaagcagacattg
aaagtcggacacggagggacgctggacagtgcagcgcaaggtgttctggtggttgggatt
ggaagaggaacaaaaatgttgaccagtatgttgtcggggtccaagaggtatatcaccatc
ggagaactggggaaagccacggacaccctggattctactgggaaggtaacggaagagaag
ccgtatgataaaataacacgagaagatatcgaaggcattctgcagaagtttactgggaat
ataatgcaagtacccccgctctattctgcgctgaagaaggatgggcagagactctcaacg
ctaatgaagaaaggcaaggtggtggaggccagaccggcccggcccgtgactgtccacagt
atctccctcctgaagttccagcctccgttcttcacgctggatgttgaatgcggaggaggc
ttttacatccggagcctggtcagtgacatcggcaaagagctctcttcctgtgccagcgtg
ctggagctgacccgcaccaaacaggggcccttcacacttgcacagcacgccctccccgaa
gacaggtggaccatcgatgacatcgaacagtccctcgagcgctgcacgtctcttctgccg
gaggagctgacatttaaaaaactaaaatctgacaactccagtgaccaggttataagctgt
ggatatataactctcagggacacaaagagagaagatgacgcagttaagacactgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (24)   
   RefSeq(nuc) (4)   
   GenBank (10)   
   EMBL (10)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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