KEGG   Mus musculus (house mouse): 72162
Entry
72162             CDS       T01002                                 
Symbol
Dhx36, 2810407E23Rik, Ddx36, RHAU, mKIAA1488
Name
(RefSeq) DEAH-box helicase 36
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    72162 (Dhx36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    72162 (Dhx36)
Enzymes [BR:mmu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     72162 (Dhx36)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     72162 (Dhx36)
SSDB
Motif
Pfam: OB_NTP_bind DEAD Helicase_C HA2_C HA2_N AAA_22 AAA_19 nSTAND3 PhoH AAA_14 ATPase AAA_23 DUF6782 AAA_34 ABC_tran ResIII
Other DBs
NCBI-GeneID: 72162
NCBI-ProteinID: NP_082412
MGI: 1919412
Ensembl: ENSMUSG00000027770
UniProt: Q8VHK9
Structure
Position
3:complement(62375436..62414464)
AA seq 1001 aa
MSYDYHQSWSRDGGPRGSGQGSSGGGGGGSRGSGGGGGGRGGRGRHPAHLKGREIGLWYA
KKQTQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKTDKDSEAQISWFAPEDHGYGTE
VSSEKKINSEKKLDNQEKKLLNQEKKTFRITDKSYIDRDSEYLLQENEPNLSLDQHLLED
LQRKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDN
YIERGKGSACRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSI
LYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSA
TLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPDQKEHRSQFKRGFMQGHV
NRQEKEEKEAIYKERWPAYIKELRTRYSASTVDVLQMMDDDKVDLNLIAALIRYIVLEEE
DGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKI
VIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQ
PGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAV
VLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSF
KDPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLS
SNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIR
LNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSP
YCLLFFGGDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDSLLQEKIESPHPV
DWDDTKSRDCAVLSAILDLIKTQEKATPRNLPPRSQDGYYS
NT seq 3006 nt   +upstreamnt  +downstreamnt
atgagctacgactatcatcagagctggagccgcgatgggggcccacggggctccggccag
ggctccagcggcggcggcggcggagggagccggggctcgggcggcggcggagggggccgc
ggcggccggggccggcatcccgcacaccttaagggtcgcgagatcggcctgtggtacgcc
aagaagcagacgcagaagaacaaggaggctgagaggcaggagagagctgtagtgcacatg
gatgaacgtcgagaagagcaaattgtgcagctgctgaattcagtccaagctaagactgac
aaagattcagaagcgcagatatcctggtttgctcctgaggatcatgggtatggtactgaa
gtttcttcagagaaaaaaataaactcagagaagaaacttgacaaccaggaaaagaaattg
ctaaaccaagaaaaaaagacatttaggatcacagacaaatcatatattgaccgagattct
gagtatttattgcaagaaaatgagccaaacctaagcttagatcaacatttactggaagat
ttacaaaggaaaaaaactgaccctcgatatatagagatgcagcgtttcagaaaaaagctg
ccttcatatggaatgcagaaggagctggtaaatctaatcaataaccatcaggtgacagta
ataagtggtgaaactggttgtggcaaaaccactcaggttacgcagttcatcttggataac
tacatcgaaagaggaaaagggtctgcctgcagaatagtgtgtactcagccgagaagaatt
agtgccatttcagtcgctgagagagtggccacagaaagggcagagtcttgtggcaatggt
aatagtactggataccagattcgtcttcaaagtcggttgccaaggaaacaaggttctatc
ttatactgcacaacaggaatcattcttcagtggctccagtccgactcacgtttgtccagt
gttagtcatattgtacttgatgaaattcatgaaaggaatctacagtcggatgttttaatg
actgttattaaagatcttctccattttcgatctgatctcaaagtaatattgatgagtgca
actttgaatgctgagaaattttcagaatattttggtaactgtccaatgatacatataccc
gggtttacttttccagttgtggaatatcttttggaagatatcattgaaaaaataagatat
gttccagaccaaaaagaacatagatcccagttcaagaggggtttcatgcagggtcatgta
aatagacaagaaaaagaagaaaaagaggccatctataaggaacgctggccagcgtatata
aaggaactgcggacaagatactctgcaagtaccgtagatgttttgcaaatgatggatgat
gataaagttgatctgaatttgattgctgcccttattcgatacattgttttggaagaagag
gatggtgcaatattggtctttctaccaggctgggacaatatcagtactttgcatgatctc
ttgatgtcacaagtgatgtttaaatcagataagtttctcattatacctttacattcactg
atgcctaccgtcaaccagacacaggtatttaaaaaaactcctcccggtgttcggaaaata
gtaattgctaccaacattgcagagactagcatcaccatagatgatgtggtttatgtaata
gatggaggaaaaattaaagaaacacactttgacacacagaacaacatcagtaccatgtct
gctgagtgggttagtaaagctaatgccaaacagaggaaagggagagctggaagagttcag
cctggtcattgttatcatctgtataatggtcttagagcaagtcttctagatgactaccaa
ctaccagaaattttgagaactcctttggaagaactctgtttgcaaataaagatcttgagg
ctgggtggaattgcttattttctgagtagattaatggatccaccatcaaatgaggcagtg
gtgctctccataaaacacctaatggaactgagtgctttggataagcaagaagaattaaca
cctcttggtgtccatttagcccgactgcctgttgagccacatattggaaaaatgattctc
tttggagctttgttctgctgcttagatccagttctcaccattgctgccagtctcagcttt
aaagatccctttgtcattccattgggaaaagaaaagattgcagatgcaagaagaaaagaa
ctggcaaaggaaactagaagtgatcacctgacagttgtgaatgcatttgagggctgggaa
gaagccaaacgacgtggtttcaggtatgaaaaggactactgctgggaatattttctgtct
tcgaacacactacagatgctgcataacatgaagggacagtttgctgagcatcttcttgga
gctggatttgtaagcagtagaagtcccaaagatccaaaagctaatataaattcagataat
gagaagataattaaagctgtcatctgtgctggtttatatcccaaagttgctaaaatccga
ctaaatttgggtaaaaagaggaaaatggtaaaagttcacacgaagtctgacggcctggtt
tctattcatcctaagtctgtcaacgtggagcagacagacttccactacaactggcttatc
tatcacctgaagatgagaacaagcagtatatacttgtacgactgtacagaagtgtcacca
tactgcctcctgttctttggaggagatatttccatccagaaagataaggatcaggaaatt
attgctgtagatgagtggattgtgtttcagtctccagaaagaattgcccatcttgttaag
ggactaagaaaggaactggatagccttctacaagagaagattgaaagccctcatcctgta
gactgggacgacactaagtcaagagactgtgcagtactgtcagctattctagacttgatc
aaaactcaagaaaaggctactccaaggaacttgccaccacggtcacaggacggatattat
agctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (24)   
   RefSeq(nuc) (6)   
   GenBank (9)   
   EMBL (9)   
3D Structure (3)   
   PDB (3)   
Protein domain (16)   
   Pfam (16)   
All databases (69)   

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