KEGG   Mus musculus (house mouse): 72843
Entry
72843             CDS       T01002                                 
Symbol
Prdm4, 1700031E19Rik, 2810470D21Rik, SC-1, SC1
Name
(RefSeq) PR domain containing 4
  KO
K12463  PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04722  Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    72843 (Prdm4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    72843 (Prdm4)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    72843 (Prdm4)
SSDB
Motif
Pfam: PRDM2_PR zf-H2C2_2 zf_PR_Knuckle zf-C2H2 zf-C2H2_4 SET zf-met zf-C2H2_jaz Mu-like_Com PyrI_C HypA
Other DBs
NCBI-GeneID: 72843
NCBI-ProteinID: NP_857633
MGI: 1920093
Ensembl: ENSMUSG00000035529
UniProt: Q80V63
Position
10:complement(85727828..85752958)
AA seq 803 aa
MNDMNLSPVGMEQLSSSSVSNALPVSGSHLGLAASPSHSAIPAPGLPVAIPNLGPSLSSL
PSALSLMLPVGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRPPPQY
IHPNSINVDGNTALSITNNPSALDPYQANGNVGLELGIVSIDSRSVNTHGAQSLHPNDGH
EVALDTTITMENVSRVTSPISTDGMAEELTMDGVTGEHPQIPNGSRSHEPLSVDSVSNSL
TAEAVGHGGVIPIHGNGLELPVVMETDHIANRVNGMSDSTLSDSIHTVAMSTNSVSVALS
TSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVPSSLQMEDSNS
NKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSIVGTD
VVGVLPLIGVWTAETIPVRTCFGPLIGQQSHSLEVAEWTDKAVNHVWKIYHTGVLEFCII
TTDENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPESELLFYYSRNYAQQIG
VPEHPDVHLCNCGKECSSYSEFKAHLTSHIHNHLPSQGHSSSHGPSHSKERKWKCSMCPQ
AFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQ
KAHLESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHL
KKHLNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKEPSSSSSAQEEEDDESEEEDLADS
MRTEDCRMGSAVYSTDESLSAHK
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgaatgacatgaacttgagcccagtggggatggagcagctgtcttcatcctctgtgagc
aatgccctgccagtctcaggaagtcacctgggcttggctgcctctccctctcacagtgcc
atccctgccccaggacttccagtggcaattccaaacctgggtccctccctgagctctctg
ccttctgccttgtctcttatgctccccgtgggcattggagaccgaggagtgatgtgtggg
ctacctgagaggaactacaccctacctccacctccttaccctcacctagagagcagttac
ttcagaaccattctacctggcattttatcttatttagctgacagaccacctcctcagtat
atccaccccaactctataaatgttgatggaaatacagcattatctatcaccaacaaccct
tcagcactagatccgtatcaggccaatggaaatgttggattagaactaggcattgtttca
atagactctcgctctgtaaacacacatggtgcccaaagtcttcatcctaatgatggccac
gaagtagcattggacacaacaatcaccatggagaatgtttctagggttaccagcccaatc
tccacagatggaatggcagaggagcttacaatggacggtgttacaggagagcatccccaa
atcccaaatggctccagaagtcatgagcctctctctgtggattctgtgagcaacagcctt
acagcagaagctgtaggacatggtggtgtgatacccattcacgggaatggtctggagctt
cctgtggtcatggaaactgaccacattgcaaaccgggtcaatgggatgtctgacagtacc
ctcagtgactccatccacaccgtggccatgagcaccaactctgtaagcgtggcactctct
acctcacacaacctggcctccctagagtctgtttccctccatgaagttggccttagccta
gagcctgtggctgtctcttctatcacgcaggaggttgccatggggacaggtcatgtagat
gtgtcctcagacagcttgtcttttgtaccatcttcactgcaaatggaagactccaattca
aacaaggaaaacatggcaaccttgtttacaatttggtgcactctttgtgaccgagcctac
ccctcagattgccctgatcatggaccagtgacttttgttcctgacacaccaatagagagc
agagcaagactatccctcccgaagcagcttgttctccgccagtccatcgtgggaacagat
gttgttggtgtccttccattgataggtgtatggactgcagaaaccattcctgtgcggact
tgcttcggacctctaattggtcagcagagtcactccttggaagtagcagagtggacagac
aaggcagttaaccatgtctggaagatataccacactggtgtcctggagttctgtatcatt
acaaccgatgagaatgagtgtaattggatgatgtttgtgcgcaaagccaggaaccgtgaa
gaacagaatttggtggcctatccccatgatgggaaaatctatttctgtacctcacaagac
atcccccctgaaagtgagctgcttttctattacagccggaattacgctcaacagataggt
gttcctgaacacccagatgtgcacctctgtaactgtggcaaggagtgcagttcctattca
gagttcaaagctcatctgaccagccatatccacaatcatctccctagccagggccacagc
agcagccatgggccaagccacagcaaggaaaggaagtggaagtgttcaatgtgcccccag
gcttttatctcgccttccaaactccacgttcactttatgggccacatgggtatgaagccc
cacaagtgtgatttttgtagcaaggcttttagtgatccaagcaacctacggacacacctc
aaaatacatacaggtcagaaaaattataggtgtactttgtgtgacaagtctttcacgcag
aaggctcacctggagtctcacatggtcatccacacgggtgagaagaatctcaagtgtgat
tactgtgacaagctgttcatgcggagacaggacctcaagcagcacgtgctcatccacacg
caagaacgccagatcaagtgtccgaagtgtgataaactgttcttgagaacaaaccacttg
aagaagcatctcaattctcacgaaggaaaacgagattatgtctgcgaaaaatgtacaaag
gcttatctaaccaagtaccatctcactcgccacctgaagacctgcaaagagcccagctcc
agctcctctgcacaggaggaagaggatgatgagtcggaggaagaagatctcgcagactcc
atgaggacagaggactgcaggatgggcagtgctgtttactcaacagacgagtctctctcc
gcacataaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (11)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (31)   
   RefSeq(nuc) (9)   
   GenBank (11)   
   EMBL (11)   
Protein domain (11)   
   Pfam (11)   
All databases (86)   

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