KEGG   Mus musculus (house mouse): 72935
Entry
72935             CDS       T01002                                 
Symbol
Ddx41, 2900024F02Rik, ABS
Name
(RefSeq) DEAD box helicase 41
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    72935 (Ddx41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    72935 (Ddx41)
Enzymes [BR:mmu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     72935 (Ddx41)
Spliceosome [BR:mmu03041]
 Complex C
  Other components
   Complex C specific factors
    72935 (Ddx41)
SSDB
Motif
Pfam: DEAD Helicase_C zf-CCHC ResIII UTP25 ERCC3_RAD25_C SecA_DEAD
Other DBs
NCBI-GeneID: 72935
NCBI-ProteinID: NP_598820
MGI: 1920185
Ensembl: ENSMUSG00000021494
UniProt: Q91VN6 Q3UAC4 Q9CUY2
Position
13:complement(55678223..55684471)
AA seq 622 aa
MEDSEPERKRARADEATAGGSRSEDEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGATE
EEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
AEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
KSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
MQTKQVSNIGRKDYLAHSSMDF
NT seq 1869 nt   +upstreamnt  +downstreamnt
atggaggattcggaaccggagcggaagcgggcacgcgcggacgaggcgaccgcgggtggg
agccgctccgaggacgaggatgaggacgacgaggactacgtaccctatgtgccgttgcgg
cagcgccggcagctactgctccagaagctgctgcagcgaagacgcaagggcgctacggag
gaagagcagcaggacagtggcagtgagccccgaggagatgaggacgacatcccgctgggc
cctcagtccaatgtcagcctcctggatcagcaccagcacctcaaagagaaggctgaagca
cgcaaggagtccgccaaggaaaagcaactgaaggaagaagaaaagattctggagagtgtg
gctgaaggccgagccttgatgtcagtgaaggaaatggccaaaggcatcacctatgacgat
ccaatcaaaactagttggacacccccgcgttatgtcctgagcatgtctgaggagcggcat
gagcgagttcggaagaagtatcacatcctggtggagggcgatggtatcccgccacccatc
aagagcttcaaggagatgaagtttcctgcagctatccttcggggcctgaaaaaaaagggc
atcctccacccaacacccattcagatccagggcatccctaccattctgtccggtcgggac
atgatcggcattgccttcacggggtcaggcaagacactggtattcactctgccagtcatc
atgttctgcctggaacaggagaagcggttgcctttctccaagcgagaggggccttatggg
ctcatcatctgcccctcgcgagagctggctcggcagacccacggcatcctggagtattac
tgccgtctgctgcaggaggacagctcacccctcctgcgctgtgccctctgcatcgggggc
atgtcggtgaaggagcagatggagaccatccgacatggtgtgcacatgatggtagccaca
cctggacgcctcatggatttgctgcagaagaaaatggtcagcctagacatctgccgctac
ctagccctggatgaagctgaccgcatgattgacatgggctttgagggtgacattcgtacc
atcttctcctacttcaagggccaacggcagactctgctcttcagtgccaccatgccgaag
aagattcaaaactttgccaagagtgccttggtaaagcctgtcaccatcaatgtgggtcgt
gctggagcagccagccttgatgtcatccaggaggtggagtatgtgaaggaggaagccaag
atggtgtacttgcttgagtgcctgcagaagacacccccacctgtgctcatctttgcagag
aagaaagcagatgtggatgccattcacgaatacctcctgctcaagggtgttgaggctgta
gccattcatgggggcaaagaccaggaagagcggaccaaggccattgaggcattccgggaa
ggcaagaaggacgtcttagtggccacagatgtggcctctaaaggcctggactttcctgcc
atccagcatgtcatcaactatgacatgcctgaagagatagaaaactatgtgcacagaatt
ggccgcactgggcgttcaggaaacacaggcatcgctaccaccttcatcaacaaggcctgc
gatgagtcagtgctcatggacctcaaagccttgttgctggaggccaagcagaaggtacca
cctgttctgcaagtgctgcactgtggggacgagtccatgctggacattggaggagaacgg
ggctgtgccttctgtggaggccttggccatcggatcactgactgccccaaacttgaagct
atgcagaccaagcaggtcagcaacattggccgcaaggactacctggcccacagctccatg
gacttctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (32)   
   RefSeq(nuc) (2)   
   GenBank (15)   
   EMBL (15)   
Protein domain (7)   
   Pfam (7)   
All databases (67)   

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