KEGG   Mus musculus (house mouse): 74351
Entry
74351             CDS       T01002                                 
Symbol
Ddx23, 3110082M05Rik, 4921506D17Rik
Name
(RefSeq) DEAD box helicase 23
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    74351 (Ddx23)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    74351 (Ddx23)
Enzymes [BR:mmu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     74351 (Ddx23)
Spliceosome [BR:mmu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    74351 (Ddx23)
 Complex C
   U5 SnRNP specific factors
    74351 (Ddx23)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19
Other DBs
NCBI-GeneID: 74351
NCBI-ProteinID: NP_001074450
MGI: 1921601
Ensembl: ENSMUSG00000003360
UniProt: D3Z0M9
Position
15:complement(98543012..98560808)
AA seq 819 aa
MAGELADKKDRDASPKEERKRSRTPERDRDRDRDRKSSPSKDRKRHRSRDRRRGGSRSRS
RSRSKSVERERRHKERERDKERDRSKKERERDKDGHRRDKDRKRSSLSPGRGKDFKSRKD
RDSKKGDEDEHGDKRPKIQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEV
EERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREEK
DKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGR
GFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKK
LDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQA
IPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELA
QQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLS
RCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQ
TVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQ
GFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVAT
DVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQ
AILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq 2460 nt   +upstreamnt  +downstreamnt
atggcaggagaactggctgacaaaaaggaccgagacgcatcacccaaggaggaaaggaag
cgatcacggactcctgagagagatcgcgatagagaccgggaccggaagtcctccccatct
aaagataggaagcggcatcgctcacgggataggcgtagaggagggagccgttctcgctct
cggtcccgttccaagtctgtagagagggaacggcggcacaaagagcgggagcgagataag
gaacgggaccggagtaagaaggagcgggagcgggacaaggatggccaccgacgggacaag
gaccgaaaaagatccagcttgtctcctggccgaggaaaggatttcaagtctcggaaggac
agagattctaagaagggtgacgaggatgaacatggagacaagcgacctaagatccagcca
ctgtccctggaggaacttctggccaagaaaaaggctgaggaggaagctgaagctaagccc
aaattcctctctaaagcagagcgggaggctgaagctctgaagcggcggcagcaggaggtg
gaggagcgccagaagatgctcgaagaggagcggaagaaaaggaaacagttccaggacctg
ggcaggaagatgctggaagatcctcaggaaagggaacggagagaacggagggaaaggatg
gagcgggagaccaacggaaatgaggatgaggaggggcggcagaagatccgggaagaaaag
gacaagagcaaggagctgcacgccattaaggagcgttacctgggtggcatcaaaaaacgg
cgccgaacaaggcatctcaatgaccgaaagtttgtgtttgagtgggatgcgtctgaagac
acctccattgattacaaccccctgtataaagaacgacaccaggtgcagctgttggggcga
ggcttcattgcaggcattgacctaaagcagcagaagcgagagcagtcacgtttctatgga
gacctgatggagaagaggcgaaccctggaggaaaaggagcaggaggaagcaagactccgc
aaacttcgcaaaaaggaggccaagcaacgctgggatgaccgccattggtcccagaagaag
ttggatgagatgacggacagggactggcggatcttccgtgaagattacagcatcaccacc
aaaggtggcaagatccccaatcccatccggtcctggaaagattcgtctctgccccctcat
atcctggaagtcattgataagtgtggctacaaggagccaacacctatccagcgtcaggcc
attcccattgggctgcagaatcgtgacatcattggtgtagctgagactggcagtggcaag
acagcagccttcctcatcccattgctagtctggatcaccacacttcccaagattgacagg
atcgaagagtcagaccagggcccttatgccatcatcctggctcctacccgtgagttggct
cagcagattgaggaagaaaccatcaagttcggaaagccactcggtatccgcactgtggct
gtcatcggtggcatctccagagaagaccaaggcttccggctacgcatgggctgtgagatt
gtgatcgccaccccggggcgcctgatcgatgtgctggagaaccggtacctggtgctgagc
cgctgcacctacgtggttctggatgaggcggataggatgattgacatgggctttgagcca
gatgtgcagaagatcctggaacacatgcctgtcagcaaccagaagccggacacagatgag
gctgaggacccggagaagatgttggccaactttgaatcaggaaaacataaataccgtcaa
acagtcatgttcacggctactatgcccccagcggtggagcgtctagccaggagctatctt
cggcgacctgctgtggtgtacattggctctgcaggcaagccccatgagcgggtggaacag
aaggtcttcctcatgtcggaatcagaaaagaggaagaagctgctggccatcttggaacaa
ggttttgatccgcctatcatcatttttgtcaaccagaagaagggttgtgatgtgttggcc
aagtctctggagaagatggggtataacgcctgtacactgcatggcggcaaaggccaggag
cagcgagaatttgcattgtccaacctcaaggctggagccaaggatattttggtggctaca
gatgtggctggccgtggtattgatatccaagatgtgtctatggttgtcaactatgatatg
gccaaaaatattgaagattacattcacagaattggccgcacaggaagagcgggcaagagt
ggcgtagccatcaccttcctcaccaaggaggactcagcggtgttctatgaactgaagcag
gccatcctggagagcccagtgtcgtcctgccctccagagctggcaaaccacccagatgcc
cagcacaaacctggcaccatcctcaccaagaagcgcagggaagagaccatctttgcttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (55)   

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