KEGG   Mus musculus (house mouse): 76983
Entry
76983             CDS       T01002                                 
Symbol
Scfd1, 3110021P21Rik, RA410, STXBP1L2
Name
(RefSeq) Sec1 family domain containing 1
  KO
K19998  sec1 family domain-containing protein 1
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    76983 (Scfd1)
Membrane trafficking [BR:mmu04131]
 SNARE
  SNARE associated proteins
   Syntaxin-binding proteins
    76983 (Scfd1)
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    76983 (Scfd1)
SSDB
Motif
Pfam: Sec1 cwf21
Other DBs
NCBI-GeneID: 76983
NCBI-ProteinID: NP_084101
MGI: 1924233
Ensembl: ENSMUSG00000020952
UniProt: Q8BRF7
Position
12:51424296..51496887
AA seq 639 aa
MVGSKMAATASIRERQTVALKRMLNFNVPHVKNSTGEPVWKVLIYDRFGQDIISPLLSVK
ELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRLCQDLRNQLYESYYLNFISAIS
RSKLEDIANAALAASAVTQVAKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITD
TEMETVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTG
DPLGTGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVNLEESTGVENS
PAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMG
LEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFE
YEEKIMSKTTLDKSLLDVISDPDAGTPEDKMRLFLIYYISAQQAPSEVDLEQYKKALTDA
GCNLSPLQYIKQWKAFAKMASTPASYGNTTTKPMGLLSRVMNTGSQFVMEGVKNLVLKQQ
NLPVTRILDNLMEMKSNPETDDYRYFDPKMLRSNDSSVPRNKSPFQEAIVFVVGGGNYIE
YQNLVDYIKAKQGKHILYGCSEIFNATQFIKQLSQLGQK
NT seq 1920 nt   +upstreamnt  +downstreamnt
atggtgggaagcaagatggcggccacggccagcattcgggagaggcaaacagtggctctg
aagcggatgttgaatttcaatgtgcctcatgttaaaaacagtactggagaaccagtatgg
aaggtactcatttatgacagatttggccaagatatcatctctcctctgctgtctgtgaag
gaactgagagacatgggcatcactctgcatctccttttgcactcagaccgagatccgatt
ccagatgttcctgcagtgtactttgtgatgccaaccgaagaaaatattgacagactgtgc
caggatcttcgaaatcagctctatgaatcctattatttaaattttatttctgcgatttca
agaagtaaactggaagacattgcgaatgcagcattggccgctagtgcagtcacacaagtt
gccaaggtttttgaccagtatctcaattttattactttggaagatgacatgtttgtatta
tgtaatcaaaataaggaacttgtttcatatcgtgccattaacaggccagacatcacagac
acagagatggaaactgttatggacactattgtggacagcctcttctgcttttttgttaca
ttaggtgctgttcccatcatccgatgctcaagaggaacggcggcagaaatggtggcagtg
aaactagataaaaaacttcgggaaaatctaagagatgcaagaaacagccttttcaccggt
gatccacttggaactggccagttcagcttccaaaggcctttattagtccttgttgacaga
aacattgacctggcaacgcctttacaccatacgtggacataccaagcgctggtacacgat
gtgctggatttccacttaaacagagtaaatttggaagaatctacaggagtggaaaactct
ccagctggtgctagaccaaagaggaaaaacaagaagtcttacgacttaactccagttgat
aaattctggcagaagcataaaggaagtccattcccagaagtcgcagaatcagtccaacaa
gaactagaatcttacagagcacaagaagatgaggtcaaacgactgaagagcattatggga
ctagaaggagaggatgaaggggccatcagcatgctttctgataacactgctaagctcaca
tcagctgtcagttctttgccagaactccttgaaaaaaaaagacttattgatctgcacaca
aatgttgccactgctgttttagaacacataaaggcaagaaaactggatgtatattttgaa
tatgaagaaaaaataatgagcaagactactctggataagtccctcctagacgtcatatcc
gaccctgatgcagggactccggaagacaaaatgaggctgtttcttatctattacataagc
gcacagcaagcaccgtccgaggttgatttggagcagtataaaaaggctttaacagatgca
ggctgcaaccttagccctttacagtatatcaagcagtggaaggcttttgccaagatggcc
tcaactcctgccagctacggaaacactaccactaaaccaatgggtctcctgtcccgagtc
atgaatacaggatcacagtttgtgatggaaggtgtgaagaacctggtattgaagcagcag
aatctacctgttactcggattttagacaatctcatggagatgaagtcaaaccctgaaact
gatgattatagatattttgatcccaaaatgctgcggagtaatgacagctcagttcctagg
aacaaaagtccattccaagaggccattgtctttgtggtaggaggaggcaactatattgaa
tatcagaatcttgttgactacataaaggcaaagcaaggcaagcatatcttatatggctgc
agtgagatttttaatgctacacagttcataaaacagctgtcacagcttggacaaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (26)   
   RefSeq(nuc) (4)   
   GenBank (11)   
   EMBL (11)   
Protein domain (2)   
   Pfam (2)   
All databases (48)   

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