KEGG   Mus musculus (house mouse): 77035
Entry
77035             CDS       T01002                                 
Symbol
Kdm8, 3110005O21Rik, Jmjd5
Name
(RefSeq) lysine (K)-specific demethylase 8
  KO
K10277  [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mmu03009]
    77035 (Kdm8)
Enzymes [BR:mmu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.73  [protein]-arginine 3-hydroxylase
     77035 (Kdm8)
Ribosome biogenesis [BR:mmu03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   77035 (Kdm8)
SSDB
Motif
Pfam: Cupin_8 JmjC_2 JmjC Cupin_2
Other DBs
NCBI-GeneID: 77035
NCBI-ProteinID: NP_084118
MGI: 1924285
Ensembl: ENSMUSG00000030752
UniProt: Q9CXT6
Position
7:125043788..125062823
AA seq 414 aa
MSEDTTEPLVGSSTLWKELRTLLPDKEEELKLDLGEKVDRSVAALLRQAVGLFYAGHWQG
CLQASEAVLDYSWEKLNTGPWRDVDKEWRRVYSFGCLLKALCLCQAPQKATTVVEALRVC
DMGLLMGAAILEDILLKVVAVLQTHQLPGKQPARGPHQDQPATKKAKCDASPAPDVMLER
MVPRLRCPPLQYFKQHFLVPGRPVILEGVADHWPCMKKWSLQYIQEIAGCRTVPVEVGSR
YTDEDWSQTLMTVDEFIQKFILSEAKDVGYLAQHQLFDQIPELKRDISIPDYCCLGNGEE
EEITINAWFGPQGTISPLHQDPQQNFLVQVLGRKYIRLYSPQESEAVYPHETHILHNTSQ
VDVENPDLEKFPKFTEAPFLSCILSPGDTLFIPAKYWHYVRSLDLSFSVSFWWS
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgtcagaggacaccacagagcccctggtggggtccagcaccctctggaaggagctcagg
acgctcctgcctgacaaagaggaggagctgaagctggacctcggtgagaaggtggacagg
agcgtggctgcgcttttgcggcaggctgtgggtctattctacgcgggccattggcagggg
tgcctgcaggccagtgaggccgtcctagactactcctgggaaaagctcaacactggtccc
tggagagatgtagacaaggagtggcgccgggtatattccttcggctgcctcctgaaggcc
ctgtgcctgtgccaggcaccacagaaggccactactgtggtggaagcactgcgggtgtgt
gacatgggcctgttgatgggggcagccatcctcgaggacattcttctcaaagttgtcgca
gtcctccagacacaccagctcccaggaaagcagcctgcccgcggcccccaccaggatcag
cctgccaccaagaaggcaaagtgtgacgccagcccagctcctgatgtcatgttagagcgg
atggtacccaggctccgctgcccacctctgcagtacttcaagcagcattttctagttcct
gggaggcctgtgatcttggaaggtgtggccgaccactggccgtgcatgaagaagtggagt
ctgcagtacatccaggagattgctggctgccgcaccgtccccgtggaagtgggctcaagg
tacacagatgaagactggtcccagactctcatgacagtcgatgagttcatccagaagttc
atcctgagcgaggcaaaggatgtcgggtaccttgctcagcaccagctcttcgaccagatc
ccagagttgaagcgggacatcagcatccctgattactgttgcctgggcaatggagaagag
gaagagatcactatcaatgcctggtttggtccacaaggcaccatctccccactgcatcag
gacccccagcagaacttcctggtccaggtgctaggaaggaagtacatccgattgtattcg
ccgcaagagtctgaggcagtgtaccctcacgagacgcacattcttcataacaccagccag
gttgatgtggaaaaccccgaccttgagaagtttcccaagttcactgaggccccattcctg
tcctgcattctgtccccaggagacaccctctttatacctgctaagtactggcattatgtg
cgctccctggacctgagcttctctgtcagcttctggtggtcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (43)   

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