KEGG   Mus musculus (house mouse): 77573
Entry
77573             CDS       T01002                                 
Symbol
Vps33a, 3830421M04Rik, bf
Name
(RefSeq) VPS33A CORVET/HOPS core subunit
  KO
K20182  vacuolar protein sorting-associated protein 33A
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04140  Autophagy - animal
mmu04148  Efferocytosis
mmu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    77573 (Vps33a)
   04148 Efferocytosis
    77573 (Vps33a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    77573 (Vps33a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mmu04131]
    77573 (Vps33a)
Membrane trafficking [BR:mmu04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    77573 (Vps33a)
   Hops complex
    77573 (Vps33a)
SSDB
Motif
Pfam: Sec1 DTP-pb9_A-dom_C Pectinesterase
Other DBs
NCBI-GeneID: 77573
NCBI-ProteinID: NP_084205
MGI: 1924823
Ensembl: ENSMUSG00000029434
UniProt: Q9D2N9
Position
5:complement(123666820..123711104)
AA seq 598 aa
MAAHLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGSRLPAADVKNIIFLVRPRLELMDIIAENVLSEDRRGPTRDFHILFVPRRSLL
CEQRLKDLGVLGSFIHREEYSLDLIPFDGDLLSMESEGAFKECYLEGDQTSLYHAAKGLM
TLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSVFPVFDNLLLLDRNVDLLTPL
ASQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGGGSGGKDLPTEAKKLQLNSAEELYAE
IRDKNFNAVGSVLSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARGSLANHTSIA
ELIKDVTTSEDFFDKLTVEQEFMSGIDTDKVNSYIEDCIAQKHPLIKVLRLVCLQSVCNS
GLKQKVLDYYRREILQTYGYEHILTLNNLEKAGLLKAQTGGRNNYPTIRKTLRLWMDDVN
EQNPTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEERQPLPTGLQKKRQ
PGENRVTLVFFLGGVTFAEIAALRFLSQLEDGGTEYVIATTKLMNGNSWIEALMEKPF
NT seq 1797 nt   +upstreamnt  +downstreamnt
atggcggcgcacctgtcgtacgggcgagtgaacctgaacgtgctgcgcgaggcggtgcgt
cgggagctgcgcgagttcctggacaagtgcgctgggagcaaggcaatagtgtgggatgag
tacttaacaggaccatttggactgatcgcacagtactcactactaaaggaacatgaagtg
gaaaaaatgttcacacttaaaggaagtcgtctgcccgcagctgatgtcaagaacatcatt
tttttggtcagacccaggctagagctgatggacataattgctgagaatgtactcagtgag
gacaggcgtggccctaccagggatttccatattttgtttgtgcctcgccggagcctactg
tgtgagcagcggctgaaggacctgggggttttgggatcctttattcatcgagaagaatac
agcttggatctcattccatttgatggggacctcttatccatggagtcagagggcgctttc
aaagagtgctacctggaaggcgaccagaccagcctgtaccacgcagccaaggggctgatg
accctgcaggcgctgtatggaactatcccccagatctttgggaaaggagagtgtgctcgg
caagtggccaatatgatggtcaggatgaagagggagttcacaggaagccagaactcagtg
ttccccgtgtttgataacctcttgctgcttgatcgcaatgtggatctcctgacgccactc
gcctcccagctcacgtatgaaggcctcatcgatgagatttacggcattcagaacagttat
gtgaagttgcctccagagaagtttgcacccaagaagcagggtggcggcagtggtgggaag
gaccttcccacggaggccaagaagcttcagctcaactccgcagaggagctctacgccgag
atccgagacaagaacttcaacgctgtgggctctgtgctcagcaagaaggcgaagatcatc
tctgcagcgttcgaggagcgacacaacgctaagacagtcggggagatcaagcagtttgtg
tcccagctaccccacatgcaggcagccaggggatcgctcgccaaccacacctcaattgca
gagttaatcaaagacgtcaccacttctgaagacttctttgataagttgacagtggagcag
gagttcatgtccgggatagacactgataaggtcaacagttacatcgaggactgcattgcc
caaaagcatccactcatcaaggtgctgagactggtttgcctccagtctgtgtgcaacagc
gggctcaagcagaaggtgctggactattacagaagggagatcctccagacctacggctat
gagcacatactgaccttgaacaacctggagaaggccggcctgctcaaggctcagacaggg
ggcagaaacaattacccaacaatccggaaaacactgcgcctctggatggacgatgtcaat
gaacaaaaccccacagacatatcctatgtgtacagcggttatgctccactcagcgtgcga
ctggctcagctcctttcccggccaggctggcggagcatcgaggaggttctccgcattctc
ccagggccccactttgaagaaagacagccactgcccaccgggctgcagaagaaacgccag
ccaggagaaaacagagtcacactggtatttttcctcgggggcgtcacctttgcggaaata
gccgccctgcgatttttgtcccagctggaagatggaggcaccgagtatgtcattgcgacc
actaaactgatgaatggaaacagctggatagaagctctcatggaaaagcctttctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (39)   
   RefSeq(nuc) (3)   
   GenBank (18)   
   EMBL (18)   
Protein domain (3)   
   Pfam (3)   
All databases (76)   

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