KEGG   Mus musculus (house mouse): 78651
Entry
78651             CDS       T01002                                 
Symbol
Lsm6, 1500031N17Rik, 2410088K19Rik
Name
(RefSeq) LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03018  RNA degradation
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    78651 (Lsm6)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    78651 (Lsm6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    78651 (Lsm6)
   03041 Spliceosome [BR:mmu03041]
    78651 (Lsm6)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     78651 (Lsm6)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     78651 (Lsm6)
Spliceosome [BR:mmu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    78651 (Lsm6)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 78651
NCBI-ProteinID: NP_001177933
MGI: 1925901
Ensembl: ENSMUSG00000031683
UniProt: P62313 Q542U7
Position
8:complement(79531497..79547781)
AA seq 80 aa
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
GDAFIRGNNVLYISTQKRRM
NT seq 243 nt   +upstreamnt  +downstreamnt
atgagcctgcggaagcaaacccctagcgacttcttaaagcagatcatcggacggccagtt
gtggtgaaattaaattctggcgtggattatcgaggggtcctggcctgcctggatggctac
atgaatatagccctggaacagacagaggagtatgtaaatggacagctgaagaataagtac
ggagatgcgttcatccgaggaaacaatgtgctgtacataagtacacagaagaggcggatg
tga

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