KEGG   Mus musculus (house mouse): 78893
Entry
78893             CDS       T01002                                 
Symbol
Cnot10, 2600001P13Rik
Name
(RefSeq) CCR4-NOT transcription complex, subunit 10
  KO
K12607  CCR4-NOT transcription complex subunit 10
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    78893 (Cnot10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    78893 (Cnot10)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     78893 (Cnot10)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_19 TPR_12 TPR_8 TPR_14 TPR_7 TPR_MalT TPR_17 DUF948
Other DBs
NCBI-GeneID: 78893
NCBI-ProteinID: NP_705813
MGI: 1926143
Ensembl: ENSMUSG00000056167
UniProt: Q8BH15
Position
9:complement(114414942..114469289)
AA seq 744 aa
MAADKPADQGAEKHEGAGQSSGVTDQEKELSASALQAFTSGNYDACLQHLACLQDINKDD
YKIILNTAVAEFFKNNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTHQAEKALHLLAVLEKMIS
QGSGGKNGKNETGNNSSKDGSNPKAESAALIEAAKSKIHQYKVRGYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGGTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHVGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPTKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASVEFAAICLRNALLLLPEEQQDPK
QENGSKSSSQLGGNTESSESSETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSA
YVALALGDNLMALNHADQLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYD
KARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQMIKRNQLLPAVKAHSDVRK
KTVFQPVHPIQPIQMPAFTTVQRK
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggctgcagacaagcctgcagatcagggagcagagaagcatgaaggggcaggccaatca
tctggggtcacggaccaggagaaggagctgtccgccagtgccctccaggccttcacgtct
ggaaattatgatgcctgtctgcaacaccttgcctgtctccaagatataaacaaagatgat
tacaaaattattctgaatacagcagtagctgaattttttaaaaataatcaaacaacaaca
gataatttgagacaaacacttaaccagctgaagaatcaggtccactcggctgttgaagag
atggatgggttagacgatgttgagaacagcatgctgtattataaccaggctgtcattctc
tatcatctgcgccagtacacggaggccatatctgtcggcgagaagctctatcagttcata
gaacctttcgaagaaaaatttgcccaagcggtgtgctttttgctcgtagacttgtatata
ttaacccaccaggctgagaaagctctgcatcttcttgccgtcctagaaaaaatgatttca
cagggtagcggtggcaaaaatgggaagaacgagactggcaataacagcagcaaagatgga
tccaaccctaaggctgagagtgcagctctaatagaggctgccaagtccaagatacaccag
tacaaagtcagagggtacatccagatgaagtccctgaaggcttgcaaaagggaaatcaag
tctgtcatgaacacagctggaaattctgcaccttccctgtttcttaaaagcaactttgag
tacttaaggggcaactatcgaaaagcggtgaagctgttgaatagttcaaacattgccgag
catccaggcttcatgaagacaggtgaatgcttgagatgcatgttctggaataaccttggt
tgtatccattttgccatgagcaagcacaatttggggattttctacttcaagaaggctctg
caggaaaatgacaacgtctgcgcccagctcagtgcgggtggcactgatccaggcaaaaag
ttttctggaagacccatgtgtacattgctgaccaacaaaagatatgagctgctctacaac
tgtgggatccagctgctgcacgtcgggaggcctctcgctgccttcgagtgtctgattgaa
gctgttcaggtgtaccacgcgaatcctcgtctctggctacggctggctgagtgctgcatt
gctgccaataaagggacttctgagcaagaaactaaaggtcttcccaccaaaaaaggcatt
gtacagtctattgttggtcagggatatcaccgtaaaatagttctggcatcacagtcaatt
cagaacactgtctacaatgatggtcagtcttcagccattcctgtagccagtgtggagttt
gcagccatctgtctcagaaatgccttgttgctgttacctgaagaacagcaagatcccaag
caggaaaatggctccaagagcagcagccagcttggagggaacacggaaagcagcgagagc
agcgagacgtgcagcagtaagagccatgatggagataagttcattcccgctccaccgtct
tctccgctgaggaaacaggagttagaaaacctcaagtgctccatccttgcttgcagtgct
tatgtggctctggccttaggtgataacctcatggctttgaaccatgcagatcagctcctg
cagcagcccaagctgtctggctctcttaaatttttgggccatttatatgccgcagaagcc
ctcatctccctcgacaggatatctgatgccattacacacttgaacccagagaatgtcact
gatgtctccttagggatctcttcaaatgagcaggaccaaggatcagacaagggtgaaaat
gaagcaatggaatcctctggcaagcgcgcccctcagtgctaccccagttctgtgaactct
gcccggactgtgatgctcttcaacctgggcagtgcctactgcctgaggagcgagtacgac
aaggcccgaaagtgtctgcatcaggcggcatcgatgatccatcctaaggaggtgccccct
gaagccatcctgctggctgtctaccttgagctgcagaatggtaatacacagctggccttg
cagatgatcaagcggaaccagctgctccccgcagtaaaggcgcactctgatgtgaggaag
aagacagtgttccagcccgtgcaccccatccagcccatccaaatgccagcgttcaccacc
gtgcagaggaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (46)   
   RefSeq(nuc) (8)   
   GenBank (19)   
   EMBL (19)   
Protein domain (10)   
   Pfam (10)   
All databases (83)   

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