KEGG   Mus musculus (house mouse): 78911
Entry
78911             CDS       T01002                                 
Symbol
Trim42, 4930486B16Rik
Name
(RefSeq) tripartite motif-containing 42
  KO
K12018  tripartite motif-containing protein 42
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mmu01009]
    78911 (Trim42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmu04121]
    78911 (Trim42)
Protein phosphatases and associated proteins [BR:mmu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     78911 (Trim42)
Ubiquitin system [BR:mmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    78911 (Trim42)
SSDB
Motif
Pfam: zf-B_box fn3 Pur_ac_phosph_N CHDCT2
Other DBs
NCBI-GeneID: 78911
NCBI-ProteinID: NP_084495
MGI: 1926161
Ensembl: ENSMUSG00000032451
UniProt: Q9D2H5
Position
9:complement(97231615..97252011)
AA seq 723 aa
METAMCVCSPCCTWQRCCPRLFSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCAEN
PNCHWCCCSWANDPNCKCCCTASTNLKCYYYESHCCRNVTITFRKGRLRSIVTSSKTALR
VGSSDTQMDEPKTMPASSHLVSHLTCPMCNRLRLHSFMLPCNHSLCEKCLRQLQKHAEVT
ENFFILICPMCSRSHCMPYSHQMHLPENYLRGRLTKRYMQQHGYLKWRFDRSSGPILCQV
CRTRRIAYKRCVTCRLNLCNDCLKAFHSDVAMQDHVFVDTSAEDQDEKICIHHPSSRINE
YCRSDNQLLCAFCKIAFHNGHDTVSLIDACSERSAALFSAIAKFKAVRYEIDNDLMEFNI
LKSSFKADKEAKRKEVRNGFLKLRAILQEKEKIIMEQIENLEVSRQKEIEKYVYITTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEEGIQNTFRPDPQLRLHSLHCIPLDFA
ELSNAIHELFPTGPKKACSSGDSLPSQYPIHSEMMIARKVTFSTHSFGNQQIYQRSSSLI
SFNTANDKGKMGLENYGRAQSAAPAKTTDGLYTYWSATGETQPPQSSNSFHNWYSFNDTS
VRTPGPIVIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELVTTPPNNVRTELCGQIRDIL
QQNLELHNLTPNTEYLFKVRAINDNGPGQWSDICKVVTPDGRGKNRAKWGLLKNIQSALQ
KRF
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggagacggctatgtgtgtctgttctccctgctgtacctggcagagatgctgcccccgg
ctgttctcctgcctgtgctgcaagttcatcttcacctccgagcggaactgcacctgcttc
ccctgcccctacaaggatgagcggaactgccagttctgccactgcacctgtgcagagaac
cccaattgccactggtgctgctgctcctgggccaatgaccccaactgtaagtgctgctgc
acggccagcaccaatctgaagtgctactactacgagagccactgctgccgcaatgttacc
atcacattcagaaagggtcgccttcgaagcatcgtcacctcctctaagaccgccctccgc
gtggggagcagcgatactcagatggatgaacccaagaccatgcctgccagcagccacctg
gtgagccacctcacctgccccatgtgcaaccggctgcgcctgcactccttcatgctgccc
tgcaaccacagcctatgcgagaagtgcctgcggcagctgcaaaagcacgccgaggtcacg
gagaatttcttcatcctcatctgccccatgtgcagccgctcgcactgtatgccctacagc
caccagatgcacctgccagaaaactacctgcgcgggcgccttactaaacgctacatgcag
cagcacggctacctcaagtggcgcttcgaccgctcctcagggcccatcctctgccaggtg
tgccgcacccggcgcattgcctacaagcgctgtgtcacctgtcgtctcaacctgtgcaac
gactgtctcaaggccttccactcagacgtggccatgcaggaccacgtcttcgtggacacc
agcgctgaggaccaggatgagaagatttgcatccaccatccatccagccgcatcaacgag
tactgccgcagcgacaaccagctactctgcgctttctgcaagatcgctttccacaatggc
catgacacggtcagcctcatagacgcctgctccgagaggtctgctgccctcttcagtgcc
atcgccaagttcaaagcagtccgatatgaaattgataatgacctgatggaattcaacatt
ctaaagagcagttttaaagctgacaaggaagcaaagaggaaggaggtccggaatggtttc
ctcaaactgcgagccatccttcaagagaaagaaaagatcatcatggaacagatagagaat
ctggaagtgtccaggcagaaagaaattgagaaatatgtgtacattacgaccatgaaagtg
aacgaaatggatggcctgattgcttactccaaagaagccctgaaggaaacaggacaggtg
gccttcctgcagtctgccaagatcctggtagaccagattgaggagggcatccagaatacc
ttcaggcccgaccctcagctgcggcttcactccctacactgtatccccttggattttgct
gaactctccaatgccatccacgagctctttcccacgggacccaaaaaggcttgctcctct
ggggactcactcccttcccagtatcctatccactcagaaatgatgatcgccaggaaggtg
acattcagcacccatagcttcggcaaccagcagatataccagcggagctcttccttgata
tccttcaacaccgccaatgacaagggcaagatgggtctggagaactacgggagagcccag
tctgccgcgcccgccaagacgactgacggcctttacacctactggagtgccacaggggaa
acccagcccccgcagagcagtaacagcttccacaactggtattccttcaacgacacctct
gtgaggaccccaggcccaattgtcatctaccagacactggtgtacccaagagctgccaag
gtttactggacgtgcccaacagaagacgtggactcctttgagatggaattctatgagctc
gttaccacccctcctaataatgtgcgcacagagctctgtggacaaattcgcgacatcctg
cagcagaacctggagctacacaacctgacccccaacactgagtatttgttcaaggttaga
gccatcaatgataatggtcccgggcagtggagtgacatctgcaaggtggtaacaccagat
gggcgtgggaagaaccgggctaagtggggactcctgaagaacatccagtctgccctccag
aagcgcttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (61)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (55)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (79)   

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