KEGG   Mus musculus (house mouse): 79221
Entry
79221             CDS       T01002                                 
Symbol
Hdac9, D030072B18Rik, HD7B, HD9, HDRP, Hdac7b, Mitr, mKIAA0744
Name
(RefSeq) histone deacetylase 9
  KO
K11409  histone deacetylase 9 [EC:3.5.1.98]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04613  Neutrophil extracellular trap formation
mmu05034  Alcoholism
mmu05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    79221 (Hdac9)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    79221 (Hdac9)
  09165 Substance dependence
   05034 Alcoholism
    79221 (Hdac9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    79221 (Hdac9)
Enzymes [BR:mmu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     79221 (Hdac9)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     79221 (Hdac9)
SSDB
Motif
Pfam: HDAC4_Gln
Other DBs
NCBI-GeneID: 79221
NCBI-ProteinID: NP_077038
MGI: 1931221
Ensembl: ENSMUSG00000004698
UniProt: Q99N13 A0A0R4J1F3
Structure
Position
12:complement(34097579..34967094)
AA seq 588 aa
MHSMISSVDVKSEVPMGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
KQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEKEQKLEQQRQEQEVERHRR
EQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVGRHPKLWYTAA
HHTSLDQSSPPLSGTSPSYKYTLPGAQDSKDDFPLRKTASEPNLKVRSRLKQKVAERRSS
PLLRRKDGNLVTSFKKRVFEVAESSVSSSSPGSGPSSPNNGPAGNVTENEASALPPTPHP
EQLVPQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSPLNASNSLKDKQKCETQMLRQ
GVPLPSQYGSSIAASSSHVHVAMEGKPTSSHQALLQHLLLKEQMRQQKLLVAGGVPLHPQ
SPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQ
IHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQSMEDRAASKDNSARSDSSACVEDTLGQV
GAVKVKEEPVDSDEDAQIQEMECGEQAAFMQQVIGKDLAPGFVIKVII
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgcacagtatgatcagctcagtggacgtgaaatcagaggttcctatgggcctggagccc
atctcacctttagacctgaggacagatctcaggatgatgatgcctgtggtggatcctgtc
gtccgcgagaagcaactgcagcaagagttacttcttattcagcagcagcagcagatccag
aagcagctcctcatagcagagtttcagaagcagcacgagaatttgacaaggcagcatcaa
gcacaactccaggagcacatcaaggaacttctagccataaaacaacagcaagaactccta
gaaaaggagcagaaactggagcagcagaggcaagaacaggaagtagagaggcatcgcaga
gagcagcagcttcctcctctcagaggcaaagatagaggacgagaaagggcagtggcaagc
acagaggttaagcagaagcttcaagaattcctgttgagtaaatcagcaacaaaagacact
ccaaccaatggaaagaatcattccgtgggccgccatcccaagctctggtacacggctgcc
caccacacatcactggatcaaagctctccacccctcagtggaacgtctccatcctacaag
tacacattaccaggagctcaagatagcaaggatgatttccccttgagaaaaactgcctca
gagcccaacttgaaggtgcggtccaggttaaaacagaaagtggcagagaggagaagcagt
cccttactcaggcggaaggatggaaatcttgtcacttcattcaagaagcgagtgtttgag
gtggcagaatcctcggtcagtagcagctctccagggtcaggtcccagttcaccaaacaat
ggccctgctgggaatgtgaccgaaaatgaggcttcagctctgcctcccacgcctcacccc
gagcaactggttccacagcagcgcatactaattcatgaagattccatgaacctgctaagt
ctctatacctccccgtccctgcccaatatcactctgggacttccagcagtgccgtcccca
ctcaatgcttctaactcactcaaagacaaacagaagtgcgagacacagatgctcagacaa
ggtgttcctctgcccagtcagtatggcagtagcattgcagcgtcctccagccacgttcat
gtagcaatggaaggaaaacccaccagcagccaccaggctctcctgcagcacctactgctg
aaggaacaaatgcgacagcaaaagcttctcgtggctggtggagttccattacaccctcag
tctcctttggcaacaaaagaaagaatttcaccaggcattagaggtacccacaaattgccc
cgccaccgacccctgaatcgaacccagtctgcacctttgcctcagagcacgctggctcag
ctggtcattcagcagcagcaccagcagttcctggagaagcagaaacaataccagcagcag
atccacatgaacaaactgctatcgaaatctattgaacaactgaagcaaccaggcagccac
cttgaagaagcagaggaggagcttcagggggaccaatccatggaagacagagcagcctct
aaggacaacagtgctaggagtgacagcagtgcttgtgtggaggacacgctgggacaagtt
ggggctgtgaaggtcaaggaggaacccgtggacagcgatgaagatgctcagatacaggaa
atggaatgtggggagcaggctgcttttatgcaacaggtaataggcaaagatttagctcca
ggatttgtaattaaagtcattatttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (44)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (41)   
DNA sequence (63)   
   RefSeq(nuc) (41)   
   GenBank (11)   
   EMBL (11)   
3D Structure (1)   
   PDB (1)   
Protein domain (1)   
   Pfam (1)   
All databases (132)   

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