KEGG   Mus musculus (house mouse): 83410
Entry
83410             CDS       T01002                                 
Symbol
Cstf2t, 64kDa, tCstF-64, tauCstF-64
Name
(RefSeq) cleavage stimulation factor, 3' pre-RNA subunit 2, tau
  KO
K14407  cleavage stimulation factor subunit 2
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    83410 (Cstf2t)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    83410 (Cstf2t)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     83410 (Cstf2t)
    U7-dependent histone pre-mRNA processing factors
     83410 (Cstf2t)
SSDB
Motif
Pfam: CSTF2_hinge RRM_1 CSTF_C RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 83410
NCBI-ProteinID: NP_112539
MGI: 1932622
Ensembl: ENSMUSG00000053536
UniProt: Q8C7E9
Position
19:31060241..31063992
AA seq 632 aa
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQPVSGPGPGGPGPSGPGGPGPGPAPGLCPGPNVML
NQQNPPAPQPQHLPRRPVKDIPPLMQTSIQGGIPAPGPIPAAVPGPGPGSLTPGGAMQPQ
VGMPVVGPVPLERGQMQISDPRPPMPRGPMPSGGIPPRGLLGDAPNDPRGGTLLSVTGEV
EPRGYMGPPHQGPPMHHGHDNRGPASHDMRGGPLAADPRMLIGEPRGPMIDQRGLPMDGR
GGRESRGMETRPMETEVLEPRGMERRMETCAMETRGMDARGLEMRGPGPSSRGPMTGGIQ
GPGPINMGAGGPQGPRQVPNIAGVGNPGGTMQGAGIQGGGMQGAGMQGGGMQGAGMQGGG
MQGAGMQAGMQGASMQGGMQGAGMQGASKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVL
QLTADQIAMLPPEQRQSILILKEQIQKSTGAS
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgtcgagtttggcggtcagagacccagccatggatcgatcgctgcgttcggtgttcgtg
gggaacattccgtatgaggcgacggaggagcagttaaaggacattttctcagaggttggt
tcagttgtcagtttccgtctcgtctacgatagagagactgggaagcccaagggttatggc
ttctgcgagtaccaagaccaggagactgcgctcagtgccatgcgaaacctcaatgggcga
gagtttagtgggagagcgcttcgggtggacaatgccgccagcgaaaagaacaaggaggag
ttaaagagcttaggcccggcggcccccatcattgactccccctatggggaccctatcgac
ccagaagatgctccagaatcgattactagagcagtcgccagcttgcccccagagcagatg
tttgagctcatgaagcagatgaagttgtgtgtccagaacagtcaccaggaagctcgaaac
atgctacttcagaacccacagttggcgtatgctttgctgcaggcacaagtggtgatgaga
atcatggatccagagattgcactgaaaattttgcatcgtaagatacatgtcacaccactg
atcccaggcaaatctcagccggtctctgggcctggccctggtgggcctgggcctagtggg
cctggcggccctggccccggccctgcccctggcctctgcccgggacctaacgtcatgttg
aaccaacagaatcctcctgcccctcagcctcagcatctgccaagaagacctgtgaaggac
attccacctctgatgcagacctctatccagggaggaattccagctccggggccaatacca
gctgcagttcctggacctggacctggttccttaactccaggaggagcaatgcagccacaa
gttggcatgccagtggttggtccagtgcccctggagcgaggacagatgcagatatcagat
cctagacctccgatgcctcgtggacccatgccttctggtggcatacctcctcgaggacta
ctgggagatgctccaaatgacccacgtggagggactttgctctcagtgactggagaagta
gagcccaggggctatatgggaccaccccatcagggtcctccaatgcatcatggtcatgac
aaccgtggccctgcctcacatgatatgagaggaggaccattggcagcagatcccagaatg
ctaattggagagcccagaggtcccatgatagatcagagaggtctacctatggatggtaga
ggaggtagagaatctcgagggatggagactcggcccatggaaactgaggtcttggagcca
cgaggaatggagagaaggatggagacctgcgcgatggaaaccagaggcatggatgcaaga
ggactagagatgaggggccctggccctagttccagaggtccgatgactggtggaatccag
ggtcctggccctattaatatgggggcaggtggccctcagggacctagacaggttccaaat
attgcaggagtgggaaatcctggaggtaccatgcagggggcaggtatacaaggaggaggg
atgcagggagcaggtatgcaaggaggagggatgcaaggagcaggcatgcaaggaggaggg
atgcagggagctggcatgcaagcagggatgcagggagctagcatgcaaggagggatgcag
ggagctggcatgcaaggagccagtaagcaaggtggaggccagcctagcagttttagccct
gggcaaagccaggtaactccacaagatcaagaaaaagcagctttgatcatgcaggttctc
cagctgactgcggatcagattgccatgctgcctcccgaacaaaggcagagcattttgatt
ttaaaggaacaaatccagaaatccactggggcttcttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (21)   
   RefSeq(nuc) (1)   
   GenBank (10)   
   EMBL (10)   
Protein domain (5)   
   Pfam (5)   
All databases (72)   

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