KEGG   Mus musculus (house mouse): 93708
Entry
93708             CDS       T01002                                 
Symbol
Pcdhgc5
Name
(RefSeq) protocadherin gamma subfamily C, 5
  KO
K16497  protocadherin gamma subfamily C
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mmu04515]
    93708 (Pcdhgc5)
Cell adhesion molecules [BR:mmu04515]
 Cadherins
  Protocadherins
   93708 (Pcdhgc5)
SSDB
Motif
Pfam: Cadherin Cadherin_tail Cadherin_2 Cadherin_C_2 PepSY
Other DBs
NCBI-GeneID: 93708
NCBI-ProteinID: NP_291061
MGI: 1935205
Ensembl: ENSMUSG00000102543
UniProt: Q91XW9
Structure
Position
18:37952599..37974926
AA seq 944 aa
MRPMASPQVAGKWQVLCMLSLCCCGWVSGQLRYSVVEESEPGTLVGNVAQDLGLKGTDLL
SRRLRLGSEENGRYFSLSLVSGALAVSQKIDRESLCGASTSCLLPVQVVTEHPLELTRVE
VEILDLNDNSPSFATPDREMRISESAAPGARFPLDSAQDPDVGTNTVSFYTLSPNSHFSL
HVKTLKDGKLFPELVLEQQLDRETQARHQLVLTAVDGGTPARSGTSLISVIVLDVNDNAP
TFQSSVLRVGLPENTPPGTLLLRLNATDPDEGTNGQLDYSFGDHTSETVKNLFGLDPSSG
AIHVLGPVDFEESNFYEIHARARDQGQPAMEGHCVIQVDVGDANDNPPEVLLASLVNPVL
ESTPVGTVVGLFNVRDRDSGRNGEVSLKTSPNLPFQIKPSENHYSLLTSQPLDREATSHY
TIELLASDAGSPPLHTHLTLRLNISDVNDNAPHFTQQLYTAYIPENRPPGSLLCTVAASD
PDEGDNARLTYSIVGSQIQGAPASSFVYVNPEDGRIFAQRTFDYELLQMLQIVVGVRDSG
SPRLHANTSLHVFVLDQNDNAPAVLHPRPGREFSAPQRLPRSAPPGSLVTKVTAVDADAG
HNAWLSYSLLPQSTAPGLFLVSAHTGEVRTARALLEDDSDTQQVVVLVRDNGDPSLSSTA
TVLLVLEDEDAEEMPKSSDFLTHPPERSDLTLYLIVALAAVSLLSLVTFTFMSAKCLRRH
EDGDRGGGHCCRGQDSPSREFYKQSSPNLQVSSDGTLKYMEVTLRPTDSQSHCYRTCFSP
ASDGSDFTFLRPLSVQQPSALALEPEALRSRSSTLRERSQQAPPNTDWRFSQAQRPGTSG
SQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHV
PDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq 2835 nt   +upstreamnt  +downstreamnt
atgaggcctatggcatcaccacaggtcgctgggaaatggcaagtgctgtgtatgttgtcc
ttgtgctgctgtggctgggtgtctgggcagcttcggtattcagtggtggaggagtctgag
ccggggactttggtggggaacgttgctcaagatctgggcttaaaggggacagatctattg
agccgcaggctgagattgggctctgaggagaatgggcgctatttttccctgagtttggtg
agcggagctttggcagtgagtcagaaaattgaccgagagagcctgtgcggagccagcact
agctgcctgctgcctgtacaggtggtaactgaacacccactggagctcacccgggtagag
gtagagatcctggacctcaatgacaactctcccagctttgccactcctgatcgagagatg
cgcatctcggaatcagctgcacctggagccaggttcccactggatagtgcccaagaccca
gatgtgggcaccaatactgtgagcttttatactctcagccccaacagccacttctctctg
catgtgaagaccctaaaagatggaaagctcttcccagagctagtgctagagcaacagcta
gaccgtgagacccaggcaagacatcagctagtactcactgccgtggatgggggaacccca
gcccgctcagggaccagccttatctcggtcattgtgctggacgtcaatgataatgcccca
accttccagtcctcggttctacgtgtgggactcccagagaacacacccccgggtacactg
ctgctccgtctcaatgccactgatccagacgagggcaccaatggccaactagactactct
tttggagaccatacatctgaaacagtgaagaatctctttggcctggatcctagcagtgga
gcaatccatgtgttgggtccagtagattttgaggaatcaaatttctatgaaattcatgca
agagctcgagaccagggacagccagccatggagggccactgtgtaattcaagtagatgta
ggggatgctaacgacaacccccctgaagtgctgctggcatctttggtcaaccctgtgcta
gagagcacacccgtaggcacggttgtggggttgtttaatgtgcgggaccgagactcaggt
agaaatggtgaggtgagcctgaagacatctccaaacctgccatttcagatcaagccttct
gagaaccactactcactgctcaccagccagcctctggaccgagaggccacatcccattat
accatcgagctgctggccagtgatgctggatcaccccccctacatacccatctcaccctc
aggctgaacatttcagacgttaatgataacgcaccccatttcacccaacagctctacact
gcttatatcccagaaaaccgcccaccaggctctctcctctgtactgtggctgcctctgat
ccagacgagggggataatgcccgcctcacctattctattgtggggagtcaaatccaggga
gccccagcctcctcctttgtgtatgtcaaccccgaggatggacgaatctttgcccagcgg
acctttgactatgagttactgcagatgctgcaaatcgtggtgggggtccgtgattccggc
tctccccgactgcatgctaacacatctctccatgtgtttgtcctcgatcagaatgataat
gccccagctgtgctgcacccacgacctggcagggagttctcagcccctcagcgtctcccc
cgatctgctcctcctggttctttggtcaccaaggtgacagccgtggatgctgacgctggt
cacaatgcatggctctcttactctctcttaccacagtccacagcccccggactgttcctt
gtatctgcacacactggtgaggtgcgcacagcccgggccttattggaggatgactctgat
acccaacaggtggtggtcctggtgagggataatggtgacccttcactatcctccacagca
acagtactgctggttctggaggacgaggatgcagaggaaatgcccaaatccagtgacttc
ctcacacaccctcctgagcggtcagacctcaccctttaccttattgtggcactagcagct
gtcagtctcttatccttagttaccttcactttcatgtcagctaagtgtctgcggaggcat
gaagatggggaccggggtgggggccactgctgcaggggccaggactcaccctccagggag
ttctataagcagtccagccccaacctccaggtgagctcagatggcacactaaagtacatg
gaggtgaccctgcggcccacggactctcagagccattgctacaggacctgcttttctccg
gcctcggatggcagtgacttcactttcctcaggcccctcagcgttcagcagccctcagcc
ttggcgctggaacccgaggccttgcgttcccgctctagtacgctgcgggagcggagccag
caagccccgcccaacactgactggcgtttctctcaagcccagagacccggcacgagcgga
tcccaaaatggtgatgaaactggcacctggcccaacaaccagtttgatacagagatgctg
caagccatgatcttggcctctgccagcgaagctgctgatgggagctctaccctgggaggg
ggcgctggcaccatgggtctgagcgctcgatacggaccccagtttaccctgcagcacgtg
cctgactaccgccagaacgtgtacatccctggcagcaatgccacgctgaccaatgccgct
ggcaaacgagatggcaaggctccagcaggtggtaatggcaacaagaagaaatcgggcaag
aaagagaagaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
3D Structure (4)   
   PDB (4)   
Protein domain (5)   
   Pfam (5)   
All databases (46)   

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