KEGG   Mus musculus (house mouse): 93709
Entry
93709             CDS       T01002                                 
Symbol
Pcdhga1
Name
(RefSeq) protocadherin gamma subfamily A, 1
  KO
K16495  protocadherin gamma subfamily A
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mmu04515]
    93709 (Pcdhga1)
Cell adhesion molecules [BR:mmu04515]
 Cadherins
  Protocadherins
   93709 (Pcdhga1)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_tail RET_CLD1 Cadherin_3 Cadherin_pro PepSY Big_9
Other DBs
NCBI-GeneID: 93709
NCBI-ProteinID: NP_291062
MGI: 1935212
Ensembl: ENSMUSG00000103144
UniProt: Q91XZ0
Structure
Position
18:37794828..37974923
AA seq 931 aa
MAIPEKLTGWSLLVLVCLSLELLLEAGAGNIRYSVPEETDKGSFVGSIAKDLGLETRELM
ERGIRIVSRGRSQLFSLNPRSGSLVTAGRIDREELCAQSTPCVVSFNILMEDEMKLLPIE
VEIIDINDNTPQFQLEELELKMSEITTPGTRIPLPLGQDLDVGINSLQSYQLSANPHFSL
DVQQGPEGPQQPEMVLQRPLDREKDAVHYLVLTASDGGSPIHSGTLQIHVQVVDVNDNPP
AFTKAEYHVSVPENVPLGTRLLKVNATDPDEGANGRVTYSFHKVDHSVVRKFQLDAYTGE
LSNKEPLDFEEYKVYPMEIQAQDGAGLMARAKVLVTVLDVNDNAPEVGITSVTNTVPENF
PPGTTIALISVHDQDADNNGHITCSIPGNLPFKLEKLVDNYYRLVTERTLDREQSSRHNI
TITATDQGTPPLSTQAHISLLVTDINDNPPVFEQDSYSVYIPENNPRGASIFSVKAQDAD
HNENALVTYALVEDTIQGVPLSSYFSINSDTGVVYALQSFDYEQFRDLQLRVMAHDSGNP
QLSSNVSLSLFMIDQNDNAPEILYPVLPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ
NSWLSYRLLKASEPGLFSVGLHTGEVRTARALLERDALKQSLVVAVQDHGQPPLSTTVTF
TIAVADSIPDLLADLGSMGTPADPQDSDLTLYLVVAVAVVSCIFLAFVIVLLVLKLRHWY
SSRLLQTEANGLTGLPASNFVGVDGVHAFLQTYSREISLTADSRKSHLIFPQPNYADTLI
SHESCEKQEFLSAPQSLLEDKEEIFSQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNN
QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq 2796 nt   +upstreamnt  +downstreamnt
atggcgattccagagaagttaaccggctggagcctgctggtgctggtgtgtctttctctg
gagctactgctggaagctggggctggaaacatccgatactctgtgccagaagaaaccgac
aaaggctccttcgtgggcagcatcgccaaggacctgggactggaaacccgggagctgatg
gagcgcgggatccgcatcgtttccagaggtaggtcgcagcttttctccctgaacccgcga
agcggcagcttggtcaccgcaggcaggatagaccgggaagagctgtgcgctcagagcacg
ccatgtgtcgtcagctttaacatccttatggaggatgaaatgaagcttctccctatcgaa
gtagagataattgatattaatgacaacactccccaattccagttagaagagctagaatta
aaaatgagtgaaataacgactccaggtaccaggatccctctgcctctcgggcaagacctt
gatgtggggataaactcacttcagagctaccagctaagcgccaaccctcacttctccctg
gatgtgcaacagggacctgaaggaccacaacagccagagatggtactgcagagacctcta
gacagagaaaaagatgctgtccactaccttgtcctcactgcctcggatggcggcagccca
atacattcagggactctgcaaattcatgtgcaggtggtagatgtgaacgacaacccacca
gcatttactaaggcagagtatcacgtgagcgtccctgagaatgtccctttaggcactcgg
ctactcaaagtgaatgcaactgacccggatgagggagctaatggcagagtaacctactcc
tttcacaaggtagaccacagtgtggtccggaaatttcagttggatgcttacacgggagaa
ctatcaaataaagaaccactagattttgaagaatacaaagtttatccaatggaaattcaa
gctcaggatggtgctggactcatggccagagctaaggtgctggtcactgttttggatgtt
aatgataatgccccggaagttggaatcacgtctgtcactaacacagtaccagaaaacttt
cctcctgggaccacaattgctcttatcagtgtgcatgatcaagacgctgataacaacggt
cacatcacatgttccatccctggcaacctaccctttaaactggaaaagctagtcgacaat
tattaccgcttagtaacagaaagaacactggacagagaacaaagttctaggcacaacatc
acaataacagcaacagatcagggaactccgcccctatctacccaagctcacatctcactg
ctagtgacagatatcaatgacaaccctccagtttttgaacaggactcctattctgtctac
attcctgaaaacaaccccagaggggcttccatcttctcagtaaaggcccaggatgctgac
cacaatgagaatgcactagtgacttacgccctggtggaagacactattcagggagtacct
ttgtcttcttacttctccatcaattctgacactggagttgtctatgcattgcaatccttt
gactatgagcagtttcgagatttgcagctaagagtgatggcccatgatagtgggaaccca
caactcagcagcaatgtatctctgagtctgttcatgatagatcagaatgacaatgcccca
gagatcctgtaccctgtcctccctactgatggctccactggtgtggagctagcacctcga
tctgctgagcccggttacctagtgaccaaagtggtagcagtggacaaagactcaggacaa
aactcttggctgtcctaccgtctgctcaaggccagtgaaccagggctcttctcggtagga
ctacacactggtgaggtacgcactgctcgggccctgctggagagagatgctctcaagcag
agcctggtggtggctgtgcaggaccacggccagcctcctctgtccaccacagtcacattt
accatagcagtagctgacagcatccctgacctcctggctgacctgggcagcatggggacc
cctgccgatccccaggattcagacctgacactctacctggtggtggcagtggctgtagtc
tcctgcatcttcctagcctttgtaatagtgctcttggtgctcaagctgcgacattggtac
tcctcacgcttgctccagactgaagcaaatggactgactggcctgcctgcctccaacttt
gtaggtgttgatggggtgcatgcatttctacagacctattcccgtgagatctcactcact
gctgactctcgaaagagccacttgatcttcccgcaacccaactatgcagacacactcatc
agccacgagagctgtgagaaacaggaatttttgtcagcaccccagtctctgcttgaagat
aaagaggaaatattttctcagcaagccccgcccaacactgactggcgtttctctcaagcc
cagagacccggcacgagcggatcccaaaatggtgatgaaactggcacctggcccaacaac
cagtttgatacagagatgctgcaagccatgatcttggcctctgccagcgaagctgctgat
gggagctctaccctgggagggggcgctggcaccatgggtctgagcgctcgatacggaccc
cagtttaccctgcagcacgtgcctgactaccgccagaacgtgtacatccctggcagcaat
gccacgctgaccaatgccgctggcaaacgagatggcaaggctccagcaggtggtaatggc
aacaagaagaaatcgggcaagaaagagaagaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
3D Structure (2)   
   PDB (2)   
Protein domain (9)   
   Pfam (9)   
All databases (33)   

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