KEGG   Mus musculus (house mouse): 94213
Entry
94213             CDS       T01002                                 
Symbol
Ddx50, 4933429B04Rik, 8430408E17Rik, GU2, RH-II
Name
(RefSeq) DExD box helicase 50
  KO
K13183  ATP-dependent RNA helicase DDX50 [EC:3.6.4.13]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    94213 (Ddx50)
Spliceosome [BR:mmu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    94213 (Ddx50)
SSDB
Motif
Pfam: DEAD Helicase_C GUCT ResIII CMS1 ERCC3_RAD25_C AAA_30
Other DBs
NCBI-GeneID: 94213
NCBI-ProteinID: NP_444413
MGI: 2182303
Ensembl: ENSMUSG00000020076
UniProt: Q99MJ9
Position
10:complement(62451571..62487260)
AA seq 734 aa
MPGKLLWGDIMELEAPLEESESQRKERQKSDRRKSRHHSESEERTETRENGVTDDLDAPK
PKKAKMREKLNGDTKEGLRFSDEFSPSHKSRRKDLPNGDVDEYEKRSKRVSSSENSHKSS
DKAEETLTREQKEGAFSNFSISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQART
GTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACF
YGGTSYQSQINQIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQ
VEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVE
HLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIA
QSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAG
RTGICVCFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVD
FFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESPEEIQDVSC
AWKELNRKLSSNAVSHVTRMCLLKGNMGVCFDVPTSESERLQAEWHDSDWILSVPAKLPE
IEEYYDGNTSSNPRQRSGWSGGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRRRSGN
RNRSRSGGHKRNFD
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgcccgggaaactcctctggggagacataatggagctcgaggcacccttggaagagtcc
gagagccagaggaaggagcggcaaaagagtgatagaaggaagtcaaggcaccattctgaa
tcagaggagagaacagaaacaagagaaaatggtgttacagatgacctggatgctcccaag
cccaaaaaagctaaaatgagagaaaagctaaatggagacaccaaagaaggacttagattt
tcagatgaattctccccatctcataagtcaagaagaaaagacctgccaaatggagatgtg
gatgagtatgagaaaaggtcaaagcgagtgtcatcctcagaaaactctcacaagtcaagc
gataaagcagaggagactctaacacgtgaacaaaaggaaggagccttctctaatttctcc
atttctgaggagaccataaagcttctgaaaggtcgaggggtaacatatctctttcctatt
caagttaaaacctttggtcctgtatatgaaggaaaagatttaattgctcaagcccggaca
ggaacaggaaagacattctcttttgccatacccttgattgaaaggctccaaagaaatcaa
gaaacaattaaaaaaagccgctcaccaaaggtactcgttttggctccaacaagggaattg
gcaaatcaagtagccaaagatttcaaagatataactagaaaactcagtgtggcgtgtttt
tatggtggaacatcatatcaaagccagattaatcaaattcggaatggtattgacatcctt
gttgggaccccagggcgtatcaaagaccatctgcaaagtggccgtttggatctttcaaag
ctacgccatgttgtgcttgatgaagtagatcaaatgttagatttaggttttgctgaacaa
gtcgaagatattattcatgaatcttacaaaactgattcggaagacaatcctcagacctta
cttttttctgcaacttgcccacagtgggtatacaaagttgcaaaaaaatacatgaaatcc
agatacgaacaggttgaccttgttggaaaaatgactcaaaaagctgcaaccactgtggaa
catttggctatccagtgccattggtctcagagaccagcagttattggagatgtccttcag
gtctacagtgggtctgaagggagagctattatcttctgtgaaactaagaagaatgttact
gaaatggccatgaatccacacataaagcagaatgctcagtgtttgcatggagacattgca
cagtcacaaagagaaattaccttgaaaggcttcagagaaggtagttttaaagttttggta
gcaaccaatgtggctgctcgtggcttggacattcctgaggttgacctagtgattcagagt
tctcctccacaggatgttgaatcctatatccatcgctctggacgcacaggtagagctggc
cggacaggaatttgtgtatgtttttatcaaccaagggaaagaggtcaactgagatatgtg
gagcagaaagctggaattacttttaaacgtgtaggtgttccgtctacaatggatttagtt
aaatctaaaagcatggatgccatcaggtctctggcttctgtttcttatgctgctgttgat
tttttccgaccatcagctcaaagactgatagaagagaagggggcagtggatgcattggct
gcagcattagctcacatttctggtgcatcaagctttgaaccacgatctttgataacttct
gataaggggtttgtgaccatgactctggagagcccagaagaaatacaggatgtcagctgc
gcttggaaggaacttaacagaaagctcagtagtaatgctgtgtctcacgtaaccagaatg
tgcctcctgaaaggaaatatgggtgtttgctttgatgttcctacaagtgagtcagaaaga
ttacaggcagagtggcatgattcagactggatactctcagtgccagccaaattacctgaa
attgaagaatattatgatggaaacacatcatctaatcccagacagaggagcggctggtct
ggcggcaggtcaggccgttcaggacggtctggtggtcgatctggtggccgatcaggtaga
cagagtcgacagggaagtcggtcaggaagtcggcaagatggtagaagacgaagtgggaac
agaaatcgatcaagaagtgggggccataaacggaattttgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (13)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (11)   
DNA sequence (39)   
   RefSeq(nuc) (11)   
   GenBank (14)   
   EMBL (14)   
Protein domain (7)   
   Pfam (7)   
All databases (78)   

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