KEGG   Pseudomonas aeruginosa PAO1: PA0336
Entry
PA0336            CDS       T00035                                 
Symbol
ygdP
Name
(RefSeq) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pae  Pseudomonas aeruginosa PAO1
Pathway
pae03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PA0336 (ygdP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pae03019]
    PA0336 (ygdP)
Messenger RNA biogenesis [BR:pae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     PA0336 (ygdP)
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-GeneID: 882290
NCBI-ProteinID: NP_249027
UniProt: Q9X4P2
Position
378096..378575
AA seq 159 aa
MIDSDGFRPNVGIILANEAGQVLWARRINQEAWQFPQGGINDRETPEEALYRELNEEVGL
EAGDVRILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLMSDEARVRMDITSKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLARD
NT seq 480 nt   +upstreamnt  +downstreamnt
gtgatcgattccgatggttttcgcccgaatgtcggcatcattctcgccaacgaggcgggg
caggtgctgtgggcgcggcgtatcaatcaggaagcctggcagttcccgcagggaggcatc
aatgatcgcgaaacgccggaagaggcgctgtatcgcgagttgaacgaagaagtcgggctg
gaggccggggacgtgcgcatcctggcctgcacccgcggctggctgcgctaccgtttgccg
cagcgcctggtgcggacccacagccagccgctgtgcatcggccagaagcagaaatggttc
ctgctgcggctgatgtccgacgaggcgcgcgtgcgcatggatatcaccagcaagcccgag
ttcgacggctggcgctgggtgagttactggtaccccctgggacaggtggtgaccttcaag
cgcgaggtctaccgccgcgccctgaaggaactggccccgcgccttctggcgcgggactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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