GenomeNet

Database: Pfam
Entry: 2Fe-2S_Ferredox
LinkDB: 2Fe-2S_Ferredox
Original site: 2Fe-2S_Ferredox 
#=GF ID   2Fe-2S_Ferredox
#=GF AC   PF11591.12
#=GF DE   Ferredoxin chloroplastic transit peptide
#=GF AU   Pollington J;0000-0002-8158-8998
#=GF SE   pdb_1fct
#=GF GA   25.00 25.00;
#=GF TC   25.50 42.40;
#=GF NC   23.40 22.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 --cpu 4 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   8174712
#=GF RT   NMR structures of ferredoxin chloroplastic transit peptide from
#=GF RT   Chlamydomonas reinhardtii promoted by trifluoroethanol in
#=GF RT   aqueous solution. 
#=GF RA   Lancelin JM, Bally I, Arlaud GJ, Blackledge M, Gans P, Stein M,
#=GF RA   Jacquot JP; 
#=GF RL   FEBS Lett. 1994;343:261-266.
#=GF RN   [2]
#=GF RM   17660315
#=GF RT   Atomic resolution modeling of the ferredoxin:[FeFe] hydrogenase
#=GF RT   complex from Chlamydomonas reinhardtii. 
#=GF RA   Chang CH, King PW, Ghirardi ML, Kim K; 
#=GF RL   Biophys J. 2007;93:3034-3045.
#=GF DR   INTERPRO; IPR023383;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   The structure of chloroplast ferredoxin in water is unstructured
#=GF CC   however in a 30:70 molar-ratio mixture of
#=GF CC   2,2,2-trifluoroethanol, residues 3 to 13 form an alpha-helix.
#=GF CC   The rest of the peptide remains unstructured [1]. This family is
#=GF CC   the N-terminal of the [2Fe-2S) ferredoxin from C.reinhardtii.
#=GF CC   This protein catalyses the final reaction in a pathway which
#=GF CC   allows the production of H(2) from water in the chloroplast [2]. 
#=GF SQ   13
#=GS A0A8J4F2D6_9CHLO/1-34  AC A0A8J4F2D6.1
#=GS A0A150GFJ1_GONPE/1-33  AC A0A150GFJ1.1
#=GS Q1WLW8_CHLIN/1-32      AC Q1WLW8.1
#=GS A0A835WI88_9CHLO/1-32  AC A0A835WI88.1
#=GS A8IV40_CHLRE/1-32      AC A8IV40.1
#=GS A0A2J8AGT4_9CHLO/1-33  AC A0A2J8AGT4.1
#=GS A0A8J4CWB6_9CHLO/1-34  AC A0A8J4CWB6.1
#=GS D8U0Z8_VOLCA/1-34      AC D8U0Z8.1
#=GS A0A150GFH7_GONPE/1-33  AC A0A150GFH7.1
#=GS A0A836BX86_9CHLO/1-33  AC A0A836BX86.1
#=GS A0A835Y0A3_9CHLO/1-33  AC A0A835Y0A3.1
#=GS A1YQX2_VOLCA/1-34      AC A1YQX2.1
#=GS A0A2J8AGS4_9CHLO/1-33  AC A0A2J8AGS4.1
A0A8J4F2D6_9CHLO/1-34             MAMMMRSSVAARVAAA.RPAVRAARPSARTVSVQA
A0A150GFJ1_GONPE/1-33             MALAMRSSFAARV-GAsRPAVRASRPATR-MTCSA
Q1WLW8_CHLIN/1-32                 MAMAMRSTFAARV-GA.KPAVRGARPASR-MSCMA
A0A835WI88_9CHLO/1-32             MAFAMRSSMAARV-GA.KPAVRGARPSSR-MTCMA
A8IV40_CHLRE/1-32                 MAMAMRSTFAARV-GA.KPAVRGARPASR-MSCMA
A0A2J8AGT4_9CHLO/1-33             MAMAMRSSFAARVSGP.RPAVRGARPASR-MSMSA
A0A8J4CWB6_9CHLO/1-34             MAMVMRSSIAARVAAA.RPAVRAARPSARTVSVQA
D8U0Z8_VOLCA/1-34                 MAMTMRSSFAARVAGS.RPAVRAARPSARTVSVNA
A0A150GFH7_GONPE/1-33             MALAMRSSFAARV-GAsRPAVRASRPATR-MTCSA
A0A836BX86_9CHLO/1-33             MAMTMRSSFAARVAGS.RPAVRGARPASR-MSCMA
A0A835Y0A3_9CHLO/1-33             MAMTMRSSFAARVAGS.RPAVRGARPASR-MSCMA
A1YQX2_VOLCA/1-34                 MSMAVRSSFAARVAGA.RPAVRAARPSARTVSVNA
A0A2J8AGS4_9CHLO/1-33             MAMAMRSSFAARVAGA.RPAVRGARPASR-MSVSA
#=GC seq_cons                     MAMAMRSSFAARVuGA.RPAVRuARPAoR.MSspA
//
DBGET integrated database retrieval system