GenomeNet

Database: Pfam
Entry: ABC_AB
LinkDB: ABC_AB
Original site: ABC_AB 
#=GF ID   ABC_AB
#=GF AC   PF21707.1
#=GF DE   Emaravirus ABC_AB protein 
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF SE   Karlin D
#=GF GA   27.50 27.50;
#=GF TC   27.50 88.30;
#=GF NC   27.30 22.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF CL   CL0761
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family corresponds to the ABC proteins of clades A and B of
#=GF CC   emaraviruses (plant-infecting bunyaviruses). They are involved
#=GF CC   in pathogenicity, and may act as silencing suppressors in some
#=GF CC   species [DOI:10.1111/aab.12576]. This family contains a
#=GF CC   hydrophobic region bordered by two highly conserved positions
#=GF CC   R/K and G. They may consist of three helices according to
#=GF CC   structure predictions.
#=GF SQ   7
#=GS A0A1W5RUL9_9VIRU/45-144  AC A0A1W5RUL9.1
#=GS VG27_EMARV/48-137        AC Q0PI71.1
#=GS A0A410JAQ1_9VIRU/44-143  AC A0A410JAQ1.1
#=GS A0A0K0M9T9_9VIRU/45-144  AC A0A0K0M9T9.1
#=GS A0A0G4DHW8_9VIRU/45-144  AC A0A0G4DHW8.1
#=GS I2GAD5_9VIRU/45-144      AC I2GAD5.1
#=GS A0A5Q5AR51_9VIRU/45-144  AC A0A5Q5AR51.1
A0A1W5RUL9_9VIRU/45-144             hln---KLRE-LAHGDLDVSDVDGKKTAIQLtPDFQTNQKVMMYFLRYHQLLASLTGMKPKFIRNIHHDFHIFGTLVRGNEMFPYIPDNMRCLLLRSDILKTAV.
VG27_EMARV/48-137                   ..m-FCILYYACTSHELKLDELVFQTAHKVImNEVSVSIGESRMFIRIYVSFHMLMGDLNEL---LHHGISKF-------EGSP-IKDMTSYLIYGEEYVRNLF.
A0A410JAQ1_9VIRU/44-143             ...QFLRFGELYDDGNIDIPEIGRTVNEIVL.DDITIKKKAMRYHFRYIQILHSILGIVDAFNDEMSPDFHIFGTLVLKNKLLPFIPDNSDCLLLSFDIIKNLI.
A0A0K0M9T9_9VIRU/45-144             ...EVIVLHDAYLKNQLEFSEINYQTQQIEI.SGMKIQKKSLRKFLRYLQITCSLFGLTSVLPESIHHDFHIFGTLVRGERIFPYIPDHSQYLLMSSNIVKAIV.
A0A0G4DHW8_9VIRU/45-144             ..e-IAVLREIYEDNSLDLSILISSAPYLII.EGNSVSRKSVKYFTRYLQFSMSLFGVSEDACSGLCPDYHIFGSVHRQKQILPYIPNNSKYLLVDTSILKES-v
I2GAD5_9VIRU/45-144                 ...EFLAMRDAYFDKKLDMSKFNSTIPHVSV.EGCNVSQKVIRYFMRYVQIVSSLFGSCNILDGNLSQDFHLFGTNVIGNSVSPVIPDNSKYLLMKPTDVQDLV.
A0A5Q5AR51_9VIRU/45-144             ...EIMAMREAYDNETLDFNLLSATIPHLTI.EGVNVTQKAIRYYLRYLQITHSLFGINGLIGEELSHDFHIFGSVTRGPKIMPYIPDNSKCLLMDSNVIKSAV.
#=GC seq_cons                       ....hhhh+-hYtcppLDhsclstphspl.l.pshslspKshRYFhRYlQlhpSLhGhsshhspplppDFHIFGolshtpclhPaIPDNSchLLhsssllKshl.
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