#=GF ID AbbA_antirepres
#=GF AC PF14156.10
#=GF DE Antirepressor AbbA
#=GF AU Eberhardt R;0000-0001-6152-1369
#=GF SE Jackhmmer:O31697
#=GF GA 27.00 27.00;
#=GF TC 27.50 35.60;
#=GF NC 25.10 24.00;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Family
#=GF RN [1]
#=GF RM 18840696
#=GF RT Parallel pathways of repression and antirepression governing the
#=GF RT transition to stationary phase in Bacillus subtilis.
#=GF RA Banse AV, Chastanet A, Rahn-Lee L, Hobbs EC, Losick R;
#=GF RL Proc Natl Acad Sci U S A. 2008;105:15547-15552.
#=GF DR INTERPRO; IPR025446;
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF CC This family inactivates the repressor AbrB, which represses
#=GF CC genes switched on during the transition from the exponential to
#=GF CC the stationary phase of growth. It binds to AbrB and prevents
#=GF CC it from binding to DNA [1].
#=GF SQ 36
#=GS A0A235FB95_9BACI/1-60 AC A0A235FB95.1
#=GS YKZF_BACSU/1-64 AC O31697.1
#=GS A0A846MK09_9BACI/1-63 AC A0A846MK09.1
#=GS A0A4S4BZG0_9BACI/1-58 AC A0A4S4BZG0.1
#=GS A0A0H4KD57_9BACI/1-61 AC A0A0H4KD57.1
#=GS A8FCM4_BACP2/1-62 AC A8FCM4.1
#=GS A0A2C1K606_9BACI/1-61 AC A0A2C1K606.1
#=GS A0A0M0LI45_9BACI/1-62 AC A0A0M0LI45.1
#=GS A0A176J8S2_9BACI/2-62 AC A0A176J8S2.1
#=GS Q65K91_BACLD/1-58 AC Q65K91.1
#=GS A0A1H0RKP9_9BACI/1-63 AC A0A1H0RKP9.1
#=GS A0A179SZT1_9BACI/1-62 AC A0A179SZT1.1
#=GS A0A428J4H9_9BACI/5-67 AC A0A428J4H9.1
#=GS A0A073KFA8_9BACI/1-61 AC A0A073KFA8.1
#=GS A0A160F4E2_9BACI/1-62 AC A0A160F4E2.1
#=GS A0A063YTF0_9BACI/1-63 AC A0A063YTF0.1
#=GS A0A7V9Z522_9BACI/1-63 AC A0A7V9Z522.1
#=GS A0A0N0VN64_9BACI/4-64 AC A0A0N0VN64.1
#=GS A0A0V8J8V9_9BACI/2-57 AC A0A0V8J8V9.1
#=GS A0A0M3R965_9BACI/1-62 AC A0A0M3R965.1
#=GS A0A6L8PK72_BACAN/1-61 AC A0A6L8PK72.1
#=GS A0A084H327_METID/1-62 AC A0A084H327.1
#=GS A0A160FE34_9BACI/1-63 AC A0A160FE34.1
#=GS A0A263BR29_9BACI/1-63 AC A0A263BR29.1
#=GS A0A268EAQ4_9BACI/1-62 AC A0A268EAQ4.1
#=GS A0A7X2LYP4_9BACI/1-62 AC A0A7X2LYP4.1
#=GS Q819J2_BACCR/1-53 AC Q819J2.1
#=GS A0A4R1QFF3_9BACI/1-63 AC A0A4R1QFF3.1
#=GS Q5L148_GEOKA/3-65 AC Q5L148.1
#=GS A0A1B1Z790_9BACI/1-62 AC A0A1B1Z790.1
#=GS A0A1E5LJH8_9BACI/1-63 AC A0A1E5LJH8.1
#=GS A0A2A8SLG1_9BACI/1-61 AC A0A2A8SLG1.1
#=GS A0A0N0I8N5_9BACI/1-63 AC A0A0N0I8N5.1
#=GS A0A366Y4R7_9BACI/1-62 AC A0A366Y4R7.1
#=GS A0A2C0ZPY7_9BACI/1-60 AC A0A2C0ZPY7.1
#=GS A0A4R6UGH6_9BACI/1-60 AC A0A4R6UGH6.1
A0A235FB95_9BACI/1-60 ....menv--.-----RFTSQEKECLIEALLNQRYALEIVDAELTDLENGNTPMDEEKAKNLYKLYKKLHN-i.....
YKZF_BACSU/1-64 ........MRmSLIGERFTEEEQKLLLNILINHEYAIELLSSEINDIETGTKNVDGTTYKKLVTLYDRFRFE......
A0A846MK09_9BACI/1-63 ........MA.KPVQETLSHEEQRLLLELLFAQRYALELVCCELADIENGDKQVDAKRYQQLLRLYDRLLQE......
A0A4S4BZG0_9BACI/1-58 .....mdl--.------LSTDDLKLLVEILFRQQYAIEIICSELNDIEAGLKSMDDESYKRLVSLYDRLRV-r.....
A0A0H4KD57_9BACI/1-61 ...mkata--.-----SLAKEEEQLLLHILFEQGYALEVVSSHLVDIEHGLKTVETKQYQEIASLYSRLR--el....
A8FCM4_BACP2/1-62 .......m--.SVIENRFNEEEKKLLLNVLLNQEYAVELLSSEINDIECGTKNVDDNTYKQLITLYDRVRFE......
A0A2C1K606_9BACI/1-61 ....meti--.----DRLSYDEQKLLVETLLRQDYAIELISSEINDIESGLIQVDEGYYHQLKLLYDRLRIK......
A0A0M0LI45_9BACI/1-62 .msvknvv--.-----TLTQEEAQLLLNVLFEQQYAVEIVSSHINDIEQGLKRVDQLQYQKIASLYNRL---cd....
A0A176J8S2_9BACI/2-62 .....gla--.---DKRLSNEEQELLISLLMKQEYAIELLSSELNDIENGEKAVDMETYKQLTVLYDRIRFE......
Q65K91_BACLD/1-58 .......m--.----ERFSEEERKLLLNVLLDHEYAVELLSSEINDIETGTKNVDSLTYKKLVTLYDRVRSE......
A0A1H0RKP9_9BACI/1-63 .mnvlerm--.-----DLSGDEKDLLLEILFSQNYALELLCCEFVDIENGDKKISIEEYKKFTQLFEKLET-g.....
A0A179SZT1_9BACI/1-62 ......me--.TTL-KKLTSEDQKLLVEILIRQQYAIEIVSSELNDIEVGAKSTDEVTYNRLVSLFDLLRI-k.....
A0A428J4H9_9BACI/5-67 ....neka--.--VWSRLTNDERELLLECLFNQKVAIDIVSAEISDMECERKQLDELKVKQLSSLYYRLC--ee....
A0A073KFA8_9BACI/1-61 ........MK.DTI--HLTREEQILLLEVLFRQNYASEILSAEITDIETGMKKVNHNEYKQMIHLFERLKTE......
A0A160F4E2_9BACI/1-62 ........MK.KWM-EQLSPDEQNLLLEVLFNQRYALEIISSELADMESGQKQVDEARYRHLVKLYERIYNE......
A0A063YTF0_9BACI/1-63 ........MT.KRLPTRLSGEEAALLLDVLFSQQYALELIRSELADIENGDKAVDEHRYRQLLRLYDRLLTE......
A0A7V9Z522_9BACI/1-63 ........MD.KQLLEQLTPEEQKLLLDVLFTQHYALELISCELADIENGNKQVEEERYKQLMHLYYRIREE......
A0A0N0VN64_9BACI/4-64 ..mehvam--.----VTLTQEEKDLLVTLLISTDVAKELVISEINDIEVGEKELEKITYQKLIELYDKI---s.....
A0A0V8J8V9_9BACI/2-57 ...slsva--.----------DKLLLADLTLTQKYAKELVQSELMEIELGLKEAEDDRVKKLNDLL------mvlhkk
A0A0M3R965_9BACI/1-62 ...mnnsv--.----KGLTADEQKLLIDVLFANEYALELLSSELYDIETGTKDVDETTYKKLVTLYDRVRF-n.....
A0A6L8PK72_BACAN/1-61 ........MK.REF--VLTEEEESLLLDILFQQNYASEILAVELTDIENGLKKTDVMQYKKITRLFYRLKNK......
A0A084H327_METID/1-62 ...mnsaa--.----EILSQDDQKFLIELLLKQQYALELVSSEIYEIENGTKQSDHATYQKLIRLYDRIRFE......
A0A160FE34_9BACI/1-63 ........MR.NEWLERLSLDEQMLLLDVLFTQQYALEIISCELSDIERGYKYVDEARHQKLVQLYHRIHE-e.....
A0A263BR29_9BACI/1-63 mektkndl--.-----LLSETEKDLLLEVLISQNYVKELVSCEITDIECGVKKTEEARIKKLNDLFDRI---vd....
A0A268EAQ4_9BACI/1-62 .......m-E.TKL-KKLTLDDKQLLAEALISQQYALEIIISELNDIESGIKRMEQSKYLQLLTLYEKLRI-r.....
A0A7X2LYP4_9BACI/1-62 ...mslav--.----QNLSTDDQVLLVDLLLNQQYALELITSEINDIENGLKTVDEQRYKKLICLYDRLRF-g.....
Q819J2_BACCR/1-53 ........MQ.REV--VLTKEEESLLLDILFQQNYASEILAVELTDIENGLKQTDVMQYKKITR--------......
A0A4R1QFF3_9BACI/1-63 ........ME.RRMDQQLSMEEQQLLVDLLFTQQYAIELISAELADIECGYKQVDAQRYKQLIGLYDRVR--af....
Q5L148_GEOKA/3-65 ........MT.KRLPTRLSGEEAALLLDVLFSQQYALELIRSELADIENGDKEVDEHRYRQLLRLYDRLLTE......
A0A1B1Z790_9BACI/1-62 ..mkyker--.--L--NLSDEDKELLVEALLSQGYAYEVVDSELKDLEYELKPGYESKMRKLNVLLKKL---hs....
A0A1E5LJH8_9BACI/1-63 ..mnkvea--.----LSLSKEEESLLVEVLLEQSYAIEVVCSQISDVEKGNKSVDEAKIKKLNALYDRL---vka...
A0A2A8SLG1_9BACI/1-61 ........MS.REI--DLTKEEQNLLLDVLFRQNYASEILAVELSDIETGRKKTDISHYKQITNLFARLRNE......
A0A0N0I8N5_9BACI/1-63 ........MT.KRLPTRLSGEEAALLLDVLFSQQYALELIRSELADIENGDKAVDEHRYRQLLRLYDRLLIE......
A0A366Y4R7_9BACI/1-62 .mssiksf--.-----SLSNEEKELLIDSLFSQKYVIEVISSMISDLENQ-AVMDEEKLKKLSVLFDRLKE-n.....
A0A2C0ZPY7_9BACI/1-60 .....mls--.---EQNFTEDELSLLVDTVMKQNYAIELISSQITDIENGLMDAGEDQYERLVHLYQKLR--d.....
A0A4R6UGH6_9BACI/1-60 .....mnr--.----EKFTVEERDLILESLFNQDMVAEVIASEIADNERRKERVPDEQMKRLSNLYDRLQK-r.....
#=GC seq_cons ................pLopEEppLLl-lLhsQpYAlElluSElsDIEsGhKplDcppY+cLspLY-RLc........
//
