#=GF ID Anti-TRAP
#=GF AC PF15777.9
#=GF DE Tryptophan RNA-binding attenuator protein inhibitory protein
#=GF AU Eberhardt R;0000-0001-6152-1369
#=GF SE Jackhmmer:O31466
#=GF GA 32.00 32.00;
#=GF TC 32.00 32.90;
#=GF NC 31.90 31.20;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -E 1000 --cpu 4 -Z 75585367 HMM pfamseq
#=GF TP Domain
#=GF WK Tryptophan_operon_leader
#=GF RN [1]
#=GF RM 11557884
#=GF RT Inhibition of the B. subtilis regulatory protein TRAP by the
#=GF RT TRAP-inhibitory protein, AT.
#=GF RA Valbuzzi A, Yanofsky C;
#=GF RL Science. 2001;293:2057-2059.
#=GF RN [2]
#=GF RM 11786553
#=GF RT The anti-trp RNA-binding attenuation protein (Anti-TRAP), AT,
#=GF RT recognizes the tryptophan-activated RNA binding domain of the
#=GF RT TRAP regulatory protein.
#=GF RA Valbuzzi A, Gollnick P, Babitzke P, Yanofsky C;
#=GF RL J Biol Chem. 2002;277:10608-10613.
#=GF RN [3]
#=GF RM 11566976
#=GF RT Posttranscription initiation control of tryptophan metabolism in
#=GF RT Bacillus subtilis by the trp RNA-binding attenuation protein
#=GF RT (TRAP), anti-TRAP, and RNA structure.
#=GF RA Babitzke P, Gollnick P;
#=GF RL J Bacteriol. 2001;183:5795-5802.
#=GF RN [4]
#=GF RM 20138150
#=GF RT Bacillus licheniformis Anti-TRAP can assemble into two types of
#=GF RT dodecameric particles with the same symmetry but inverted
#=GF RT orientation of trimers.
#=GF RA Shevtsov MB, Chen Y, Isupov MN, Leech A, Gollnick P, Antson AA;
#=GF RL J Struct Biol. 2010;170:127-133.
#=GF DR INTERPRO; IPR031538;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF SQ 25
#=GS A0A1W2EBJ9_9FIRM/2-50 AC A0A1W2EBJ9.1
#=GS A0A4R2NPX8_9BACL/1-58 AC A0A4R2NPX8.1
#=GS A0A348AHL2_9FIRM/2-51 AC A0A348AHL2.1
#=GS A0A5B9W1S5_9BACT/1-55 AC A0A5B9W1S5.1
#=GS A0A494WUP3_9FIRM/1-64 AC A0A494WUP3.1
#=GS A0A7W7C5C8_9PSEU/83-124 AC A0A7W7C5C8.1
#=GS A0A259U582_9FIRM/1-51 AC A0A259U582.1
#=GS A0A0D1V099_ANEMI/1-62 AC A0A0D1V099.1
#=GS RTPA_BACSU/1-52 AC O31466.1
#=GS A0A1I7FEY9_9BACL/1-70 AC A0A1I7FEY9.1
#=GS Q65NU7_BACLD/1-52 AC Q65NU7.1
#=GS A0A2N5MCQ3_9BACI/2-35 AC A0A2N5MCQ3.1
#=GS A0A270BB68_9SPHN/25-74 AC A0A270BB68.1
#=GS A0A1G9MXL8_9FIRM/1-50 AC A0A1G9MXL8.1
#=GS A0A6I4U556_9SPHN/19-80 AC A0A6I4U556.1
#=GS A0A0M4G9N5_9BACI/1-52 AC A0A0M4G9N5.1
#=GS A0A517DT30_9FIRM/2-50 AC A0A517DT30.1
#=GS A0LL54_SYNFM/1-59 AC A0LL54.1
#=GS A0A328AIP6_9CAUL/11-65 AC A0A328AIP6.1
#=GS A0A246JXI7_9SPHN/29-79 AC A0A246JXI7.1
#=GS A0A081NVR9_9BACL/1-50 AC A0A081NVR9.1
#=GS A0A259USK8_9FIRM/1-50 AC A0A259USK8.1
#=GS A0A402BW72_9FIRM/1-51 AC A0A402BW72.1
#=GS A0A0U1L0I3_9FIRM/1-51 AC A0A0U1L0I3.1
#=GS D4Z607_SPHJU/1-64 AC D4Z607.1
A0A1W2EBJ9_9FIRM/2-50 ...........kkdl-------NMEKECAKCHGRGKINNT.............----.--.....I...CAACNGTGTVLTEDGLKILKFLR----dgi.
A0A4R2NPX8_9BACL/1-58 ..........msntv---FTTDELEMPCPECKGKGEIVSH.............--GK.ST.....S...CTKCEGKGVIMTGLGQTLLHFVKKHL-....
A0A348AHL2_9FIRM/2-51 ...........dkri-------NLEKECMRCQGAGKIDGK.............----.--.....T...CAACEGKGTVLTEEGKKILEYLRN---sir.
A0A5B9W1S5_9BACT/1-55 ...........mefv-------DIYVPCPLCEGHGRLPER............aSVPR.TR.....T...CPECDGSGLRPTSEGRVILDLLK----vt..
A0A494WUP3_9FIRM/1-64 ........maniddl-----LGKLEVPCQACKGEGYIGGV.............DDDG.MI.....HenvCPECRGKKYMPSEVGRKLLDFIRKYL-c...
A0A7W7C5C8_9PSEU/83-124 gdnvitrahktanth-------------------------.............----.-P.....A...CPDCKGKGKELTAEGKALLEFIKR---w...
A0A259U582_9FIRM/1-51 .........mgtnlt--------LEETCTACKGLGKIGTK.............----.--.....P...CQNCQGTGTVLNEAGKKILNYLR----nsir
A0A0D1V099_ANEMI/1-62 ...............MSIIAMDDLEHACWECNGKGEIPSDse.........vhEGNE.MM.....S...CPKCDGKGYIPTALGQTILGFVKRHL-....
RTPA_BACSU/1-52 ...............MV-IATDDLEVACPKCERAGEIEGT.............----.--.....P...CPACSGKGVILTAQGYTLLDFIQKHLN....
A0A1I7FEY9_9BACL/1-70 ...............MT-IALDDLEQRCWECNGSGRVPAVdgertagerndgeRIDG.ER.....V...CPKCGGKGVVLTALGQTLLDFIRRHL-....
Q65NU7_BACLD/1-52 ...............MV-IATDDLETTCPNCNGSGREEPE.............----.--.....P...CPKCSGKGVILTAQGSTLLHFIKKHLN....
A0A2N5MCQ3_9BACI/2-35 ............leg-------------------------.............--NT.NV.....P...CKNCDGKGTIPTAEGQQLLDFINK---ys..
A0A270BB68_9SPHN/25-74 .............rp----RTGDLDVICPVCAGYGQWNSQid........fvsQRSI.RV.....P...CPKCDGRGWIETG--------------ad..
A0A1G9MXL8_9FIRM/1-50 ............mks-----TSSIEEECLSCHGTGKINQK.............----.--.....K...CPACNGTGTSLTEDGQKLLKFLR----dsi.
A0A6I4U556_9SPHN/19-80 ...........erve------PQLYRECEKCGGSGTFNES.............EKRGsSMtfshgP...CPDCESIGAIPTDEGARVLDLIRR---wr..
A0A0M4G9N5_9BACI/1-52 ...............MV-LATDDLEITCPSCKGTGEGDAA.............----.--.....P...CEKCSGKGVILTGQGNTLLHFIKKHLN....
A0A517DT30_9FIRM/2-50 ...........dnnl-------QLEKECSTCNGCGKIANK.............----.--.....A...CPVCNGTGTVLTADGLQVLKYLR----dsi.
A0LL54_SYNFM/1-59 ...............MVRMRLPELETKCWMCWGSGKIASE.............DHGG.GM.....E...CPECGGVGWLPTADGRRLLDFVQRHLG....
A0A328AIP6_9CAUL/11-65 .............pt---LALMDLERRCEACSGHGFVRVA.............--GR.PL.....D...CEVCEGRGAIATEAGRRVLDFLRR---ya..
A0A246JXI7_9SPHN/29-79 ..........nalgg-------DLDVRCPVCSGHGQWNSQid.........liSHRSiRV.....P...CPKCDGRGWIETG--------------adm.
A0A081NVR9_9BACL/1-50 ..............m---ISMDDLEITCPECNGKGESEGT.............----.--.....P...CKKCDSKGVILTSLGQTLLYFIKKH--t...
A0A259USK8_9FIRM/1-50 ..........mktna-------TLEETCSSCKGSGKIGTE.............----.--.....P...CQTCQGTGTVLNEEGKEILNFLR----dsi.
A0A402BW72_9FIRM/1-51 ..........matdl-------KVEKECPKCHGHGKIANK.............----.--.....D...CDTCNGTGTILTEDGLKILNYLR----nsir
A0A0U1L0I3_9FIRM/1-51 ..........mktna-------TLEETCSSCKGSGKIGTE.............----.--.....P...CQTCQGTGTVLNEEGKEILNFLRN---sir.
D4Z607_SPHJU/1-64 ............msg-TDSGLPELEEPCDACNGTGDAPPAt..........pyEPRA.SL.....N...CPKCKGHKLAPTEAGQKLIEFIKRRFN....
#=GC seq_cons ..............h.......cLEppCspCpGpGclssp.........................s...CspCsG+GslhTspGpplLcFl+p.......
//
