GenomeNet

Database: Pfam
Entry: Arc_PepC
LinkDB: Arc_PepC
Original site: Arc_PepC 
#=GF ID   Arc_PepC
#=GF AC   PF06819.15
#=GF DE   Archaeal Peptidase A24 C-terminal Domain
#=GF AU   Yeats C;0000-0003-0080-6242
#=GF SE   Yeats C
#=GF GA   23.40 23.40;
#=GF TC   23.60 23.40;
#=GF NC   23.30 23.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF DR   INTERPRO; IPR009639;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This region is of unknown function but is found in some archaeal
#=GF CC   Pfam:PF01478. It is predicted to be of mixed alpha/beta
#=GF CC   secondary structure by JPred.
#=GF SQ   34
#=GS A0A133UJ84_9EURY/237-350  AC A0A133UJ84.1
#=GS A6UVJ3_META3/209-318      AC A6UVJ3.1
#=GS F0T697_METLA/244-355      AC F0T697.1
#=GS C6A3F0_THESM/230-341      AC C6A3F0.1
#=GS A0A656YXC7_9EURY/129-235  AC A0A656YXC7.1
#=GS A0A166DBK3_9EURY/269-372  AC A0A166DBK3.1
#=GS Q6M0N8_METMP/209-316      AC Q6M0N8.1
#=GS Q5JED9_THEKO/255-365      AC Q5JED9.1
#=GS R9SJ33_9EURY/141-250      AC R9SJ33.1
#=GS A0A133V4S6_9EURY/237-350  AC A0A133V4S6.1
#=GS A0A328SBW7_9EURY/230-338  AC A0A328SBW7.1
#=GS A0A133V6X1_9EURY/125-231  AC A0A133V6X1.1
#=GS Q8TXH1_METKA/207-291      AC Q8TXH1.1
#=GS A0A133VCL6_9EURY/122-227  AC A0A133VCL6.1
#=GS E3GY43_METFV/228-338      AC E3GY43.1
#=GS U6EBB7_9EURY/239-351      AC U6EBB7.1
#=GS A0A328SE80_9EURY/11-110   AC A0A328SE80.1
#=GS A0A133VJN6_9EURY/235-348  AC A0A133VJN6.1
#=GS Q8U3J5_PYRFU/254-362      AC Q8U3J5.1
#=GS A0A2Z4L7N1_9EURY/200-301  AC A0A2Z4L7N1.1
#=GS Y421_METTH/240-350        AC O26521.1
#=GS Y83C_METJA/207-313        AC P81324.1
#=GS A0A133UAN0_9EURY/237-350  AC A0A133UAN0.1
#=GS A0A1D3L212_9EURY/239-350  AC A0A1D3L212.1
#=GS D7DUR7_METV3/205-310      AC D7DUR7.1
#=GS F6BDF8_METIK/205-313      AC F6BDF8.1
#=GS F0LGY6_THEBM/230-341      AC F0LGY6.1
#=GS A0A1V6N1B2_METAZ/35-151   AC A0A1V6N1B2.1
#=GS A0A133VGY5_9EURY/120-226  AC A0A133VGY5.1
#=GS A0A133VLJ9_9EURY/226-339  AC A0A133VLJ9.1
#=GS A0A328SJ31_9EURY/208-310  AC A0A328SJ31.1
#=GS A0A1D2W5B8_9EURY/239-351  AC A0A1D2W5B8.1
#=GS A0A133U6M7_9EURY/129-235  AC A0A133U6M7.1
#=GS A0A133UE51_9EURY/240-353  AC A0A133UE51.1
A0A133UJ84_9EURY/237-350             ............................mt--FVVALAIRLVFSSI.KV..IDR.RIL.Q.EKISIGELEEGMIPAETIYEE-DGKVR...RyESPGLKERAKQIFMNPSSLR.LSQD...wDRVLAdSR..LAAGVSEEQVQALKGYVEDDELEDHIRI..........
A6UVJ3_META3/209-318                 ..............................QFLVYVGELSLISIVI.YA..LTG.AEI.S.SKKLVKDLKEGDILRDIITIEGN-SVT...V.EGANILKRFKLMVD-AEMGK.NETE...nKKILM.TD..-GEGLYKEDLELLQKLHKEGKIPNELNL..........
F0T697_METLA/244-355                 .............................f-LFISINVIEIIKKLL.TS..VSK.QAL.E.EDYKIDELKEGMIPAYNLYEN-DDEIY...E.DKSTFFGRLKQGISSGDVSK.LNGP...qDKLII.ST..MAAGLNTENIEYLKELRDKKKMKDNLKV..........
C6A3F0_THESM/230-341                 ...........................kia---LTFYLFKTFFSLV.SI..MRV.EVL.T.KKVSVNELKEWDILGEWIYEK-DGKIQ...R.DREGSFDKLIRALKTLNVNA.LRVY...yDKLIA.YP..TAEGLTKENIEILKRLVEEEKLEDEFLV..........
A0A656YXC7_9EURY/129-235             .............................n-SVIIVLPVFLIFALI.SK..IRG.EGI.FyNIVKISNLEEGMIPAEIIYEK-DGEFE...R.YEAGYLGFISRKVGTPDWDR.R---....--LTD.PD..KAAGVSQEQVDLLKELVEEEKLEDEIKI..........
A0A166DBK3_9EURY/269-372             ........................igflfs------FIFKIISSNF.RK..IAK.IGL.N.NKIAIDKLEEGMILDEIQINKDDD---...N.DIRGIVFKSNSNIH--DSNQ.NL--....-KLLK.SK..SVAGLNKDDIKLLNRLYKNDLIDK----sipi......
Q6M0N8_METMP/209-316                 .............................s-FFVYIGQLSLISLVI.YA..LTG.AEI.S.SKKQISDLKEGDIIRDIVTIKENGEVT...V.ENANILKRFKHMIY-GEMGK.LE--....GKSLM.TD..-GEGLSDENLELLNKLQNEGKIGGELNV..........
Q5JED9_THEKO/255-365                 .............................k-VLATIYAVKVLLSTA.KI..LRG.KVL.V.EEVPVEELHEWDILGETIHEL-NGEVK...R.EREGTIERFKRALSTWDFSE.IRPK...vGRVVA.SP..TAEGLTKEQIEELKKLVEEGKLENRF--l.........
R9SJ33_9EURY/141-250                 nikkanlknrikyeilffnlirstnsfsty----------------.--..---.---.-.-IKEINQLREGMILDTIIFTNKDQ--F...I.EIKNIIENKKDSNLSC---K.IKDD....KLYIK.CE..SSAGITDYDIQSLRELCNK-KIMD----krvf......
A0A133V4S6_9EURY/237-350             ............................mt--FVVALAIRLVFSSI.KV..IDR.RIL.Q.EKISIGELEEGMIPAETIYEE-DGKVR...RyESPGLKERAKQIFMNPSSLR.LSQD...wDRVLAdSR..LAAGVSEEQVQALKGYVEDDELEDHIRI..........
A0A328SBW7_9EURY/230-338             ....................niliyleelv-----ILSFTIMVKNI.YAtgLIK.EAL.T.EKTLKTSLEEGMILAYPLYCQDN-KYY...F.DKSTLYTKVKNHISGKDMGK.LV--....----C.NT..QASGLTIEDIFKIIEIDEIDKVP-----ik........
A0A133V6X1_9EURY/125-231             .....................nsvilaapa---------LLIYAVL.SR..LRGgGAF.Y.EEVKLSEIEEGMIPAEIIYEK-DGEIE...R.RSPGPLGFLTERLGNPDWDR.K---....--LTS.PW..KAAGFSPHDVEVLRELVRKGKLENRIRI..........
Q8TXH1_METKA/207-291                 .............giavalstafttyrwag----------------.--..---.---.-.KERNVEELREGEIPLEIVVRTEEG---...-.--TERVGRLKGALL-VATGR.----....AEPVV.VP..SGDGFTEEELEKLKRL------------gidr......
A0A133VCL6_9EURY/122-227             .................giiaaipflliyv-------------AVS.RA..MGR.GAF.Y.ETVKISELKEGMIPAEIIYEK-NGKIK...R.YDSGYFGFLSRAFGTPEWDR.----....-QLAN.PD..RAAGISRYYVGVLRRMVREGKLKDRIKI..........
E3GY43_METFV/228-338                 .............................s-IFITLLIFSFLLNFF.TR..IVT.EAL.R.DDVKVEDLKEGMILAYDLVEK-NGKIF...F.DSKPLKEKIKECLRMGNIGP.IINP....GRILI.KS..MAAGLSEKDIKLLEKLVKEKKLENKIKI..........
U6EBB7_9EURY/239-351                 .............................i-LFVSINIVKTVIKLL.GS..VSK.KAL.Q.DDVPLDKLREGMIPAYNVYQQDDDEIF...V.DDKSFTQKLKESFKNKDPSL.ITTP...qGKRLV.GT..LAAGLTDKDIDLLKKLNQEDKIPDEFRI..........
A0A328SE80_9EURY/11-110              ....................niiaytiqla----VITALLIIKALFnRQ..VLR.RAM.S.DKIRLSQLIEGQILTYPLTKKDN-IYA...F.TDKSILARQKEN--------.----....KDIII.DN..MARGLTNDEIQLLWKLYSKD--------sy........
A0A133VJN6_9EURY/235-348             ............................fa--FVIVLGVRFIITSV.KV..VNR.EVL.Q.EEIPISELTEGMIPAEDIYVKNGKAER...Y.EGPGFLERAKNQLSDSSSKE.SRSE...wDKVLAdSS..LAAGVSEEQAEELKKHVEKGEIEDRIRI..........
Q8U3J5_PYRFU/254-362                 .............................r-LVIILYAFKLLLSSV.KM..LRK.EVL.T.KVKRVEELKEGEVLGERILEV-GGKIV...R.DRKDFFEKLNEVLKSGKFEQ.IS--....GKEIA.GF..SVEGLTKEQIEELKKLVSEGKLENEFLV..........
A0A2Z4L7N1_9EURY/200-301             ...........................iet---IIILCIVLIKNVM.KN.dLIK.QVL.S.REVTLDNLSESMILSYSLIRY-DDKYF...F.DKRGLKEKIL---QKED---.----....YEYII.TQ..KAHGLTIEDISLLKHLHKKGVIGNKVL-i.........
Y421_METTH/240-350                   .............................i-LWVSITVIQLIRKLL.TS..ITR.EAL.Q.DTMGVDELKEGMILASTLYRK-GDEYY...F.DDSSLLDRFRTAARTGDVSA.LTYR....GEPVV.SA..MAAGLREEEIETLRDLVSRGKIKDEFRI..........
Y83C_METJA/207-313                   .............................t-SIIYLCEIILISIVI.YA..LTG.VET.S.DKKHIEELKEGDILRDVIIIDKDG-VE...V.KNLNIMKRIKFLLE-HEIKE.NE--....KEIIL.TD..-GEGLSNEDIRKIKKLYMEGKIPDKLNV..........
A0A133UAN0_9EURY/237-350             ............................it--FAVVLAIRLLFSGI.KV..IDR.RIL.Q.EKISIGELEEGMIPAETIYEK-DGEVQ...RyESPGVMERAKQILLNPSSFR.LSPD...wDRVLAdSR..LAAGVSEEQVEALKSYVEKDDLENHIRI..........
A0A1D3L212_9EURY/239-350             .............................f-LLVSITFVNIVRKVL.TS..VSR.EAL.Q.DDYRISQLKEGMIPAYNMYEL-DGEIQ...I.DDTGFFSKAKEAVKTGDISK.LSGP...rGKLVV.GA..LAAGLQKKDIDYLKDILKEGKIEDNLRI..........
D7DUR7_METV3/205-310                 .............................n-YAVYGLELSLLSVVI.YA..LTG.AEI.S.IKKPISELKEGDIIRDIIIIN-GDNVS...V.NNSSLFKRIKIMFN-AQIGK.IE--....GKVIN.LD..-GEGLSNEDIDLIKDLNSKGKITD----vni.......
F6BDF8_METIK/205-313                 .............................s-SLIYVGELTLISIVI.YA..LMG.AEV.S.DKKAIGELKEGDILRDIIVLKDNGDVV...V.ENANLIKRIKFLIDYEKGGK.KD--....YKLIF.TD..-GEGLSEETIKLLKELHKNGKIPNELNV..........
F0LGY6_THEBM/230-341                 .............................k-LLVIFYIFKVFFSLT.KV..LRE.EIL.I.ERKPIEELKEWDILGEWIYEK-NGEIL...R.DRESFTDKFKKALVAGNLSL.LKLS...yENVIA.SP..TAEGLTKEQIEKLKKLVEEGRLENEFI-v.........
A0A1V6N1B2_METAZ/35-151              ................fsllskftskillk---------------F.KK..IVK.YGS.K.KQIKIEYLKEGMIVDKLVINSFNSNNIasdV.NLEYLLTKFNLKNE-KNFYN.ISFKknknNYILT.SK..TAAGLSKQDLLLIKKLFNNNMISK----tvsi......
A0A133VGY5_9EURY/120-226             ......................nsvlaaip--------VLLIYVLV.SR..LKG.FGIfY.ETKKISELEEGIIPAEIIYQK-NEEIE...R.YDAGPLGFLSRKLSAPDWDE.----....-KLTD.PD..RAAGVTDENIEKLKQLVDEGKLEDRI--kt........
A0A133VLJ9_9EURY/226-339             ..........................vafa----IAFGIRLIISSI.KV..VNR.HVL.Q.EKIPIDELEEGMIPAETIYEK-DGEVE...R.YESPGIKETASNIL-DDPTN.FRFRp..dWDEVV.SDssLAAGVSQEQAESLKRLVGEGELENHIRI..........
A0A328SJ31_9EURY/208-310             ......siliylesfillslllttknvyhn----------------.-G..IIS.EVL.T.DEIDVSSLEEGMILKYPLYSN-EDAYY...F.DKSSFY----------DLSK.EK--....GKLIC.SN..NPRGVSKSDMELLRK-------------ysptptvkik
A0A1D2W5B8_9EURY/239-351             .............................a-IFLSITVIGIIRKLI.TS..VNR.KAL.Q.DDYEISDLKEGMIPAYNMYER-ADEVY...V.DDKGFFDKIKESLKNGDPTAgITAH...kGKLLI.SS..MAAGLTEDNIILLKKLFEENKIDPKIKI..........
A0A133U6M7_9EURY/129-235             .............................n-SVIIVLPVFLVFALI.SK..IRG.EGI.FyNIVKISDLEEGMIPAEIIYEK-DGEFE...R.YEAGYLGFISRKVKTPDWDR.RL--....---TD.PD..KAAGVTQEQVDVLKKLVEEEKLEDEIKI..........
A0A133UE51_9EURY/240-353             ............................mt--FVVALAIRLVFSSV.KV..IDR.RIL.Q.EKISIGELEEGMIPAETIYEK-DGKVR...RyESPGLKERAKQIFMNPSSLR.LSQD...wDRVLAdSR..LAAGVSEEQVEALKGYVEDDELEDHIRI..........
#=GC seq_cons                        .............................s..hl.hh.lpllhthl.ps..lpp.psl.p.-chpIs-LcEGMI.u-hlacc.ssclh...h.-psuhhp+hKptltsschsc.hp......tclls.ss..hAuGlocEpl-hLKcLsccsKlcsch.l..........
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