GenomeNet

Database: Pfam
Entry: Arteri_GP4
LinkDB: Arteri_GP4
Original site: Arteri_GP4 
#=GF ID   Arteri_GP4
#=GF AC   PF02497.19
#=GF DE   Arterivirus glycoprotein
#=GF PI   Art_glycop; 
#=GF AU   Mian N;0000-0003-4284-4749
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Pfam-B_787 (release 5.4)
#=GF GA   24.00 24.00;
#=GF TC   24.60 24.00;
#=GF NC   22.60 23.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   7948197
#=GF RT   Cloning, expression, and sequence analysis of the ORF4 gene of
#=GF RT   the porcine reproductive and respiratory syndrome virus MN-1b. 
#=GF RA   Kwang J, Kim HS, Joo HS; 
#=GF RL   J Vet Diagn Invest 1994;6:293-296.
#=GF DR   INTERPRO; IPR003412;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a family of structural glycoproteins from arterivirus
#=GF CC   that corresponds to open reading frame 4 (ORF4) of the virus.
#=GF SQ   10
#=GS A0A159D6R6_9NIDO/68-168  AC A0A159D6R6.1
#=GS A0A2H4MYR4_9NIDO/1-178   AC A0A2H4MYR4.1
#=GS A0A1Z2RX60_9NIDO/41-156  AC A0A1Z2RX60.1
#=GS P89135_SHFV/30-203       AC P89135.1
#=GS GP4_PRRSL/1-183          AC Q04568.1
#=GS Q773G7_PRRSB/1-178       AC Q773G7.1
#=GS Q9ENK3_PRRSV/1-178       AC Q9ENK3.1
#=GS A0A0B5JKI0_9NIDO/6-180   AC A0A0B5JKI0.1
#=GS Q83021_LDV/6-175         AC Q83021.1
#=GS A0A6B9PVZ4_9NIDO/1-181   AC A0A6B9PVZ4.1
A0A159D6R6_9NIDO/68-168             ....................................................cddyklvgeilsasevttgqlkgl------------------------------------------------------.---.---.----......-----------..-------..--------DDAFTLLSFSRCLMRALEFKQANISHRFTMANSTLQLCANLTNTYSYLS-----.------IQTPW.FISPGAIRWATIFCSIIAVLRA-f
A0A2H4MYR4_9NIDO/1-178              ............................................................................MGPSLLFMLVGVVGFHFSEGYACKPCYGASYVDRASKSSAVAPLA-VTPLSCDR.DED.KEKtLSLR......GTPAMVCKQGD..SKGFKINdvIEIKDDYSGSSADLLFFTACMIYGLEMAEKGLGPELKNCSGTPCMCVPFSSWVAHVREKGGD.Q--QVQRGLFT.NMSPHGLRWATVITCLLAILLAI.
A0A1Z2RX60_9NIDO/41-156             .......................................................lkqtdvlkadlgyglmfddtt------------------------------------------------------.---.---.----......-----------..--QMTIK..YNYS--VHSRGLALLGLLSCLTYGLHELEMHGHAQIGSILNRPVVC---TDRPFHDDLNTTV.HHSV-GAWTLH.ILSPATIKWGTVIICLVAYLIAV.
P89135_SHFV/30-203                  fayvlcgivaalssvpansnaercmicttnnfstlftessyqhyprwpvfqdgldyvyrpplvaqvlgygetcddt------------------------------------------------------.---.---.----......------QIIGTiiETYETIT..GNMTGIKEAFIA--LDFADCLLTGILYREHNVTAVFQQQDGHIVLCWNGTDP----------.RISINQIPTPW.FISPGALRWATIICACLAIFRA-f
GP4_PRRSL/1-183                     ............................................................................MAAATLFFLAGAQHIMVSEAFACKPCFSTHLSDIETNTTAAAGFMVLQDINCFRpHGV.SAAqEKISf....gKSSQCREAVGT..PQYITIT..ANVTDESYLYNADLLMLSACLFYASEMSEKGFKVIFGNVSGVVSACVNFTDYVAHVTQHTQQhHLVIDHIRLLH.FLTPSAMRWATTIACLFAILLAI.
Q773G7_PRRSB/1-178                  ............................................................................MAAPLLFLLVGFKCFVVSQAFACKPCFSSSLSDIKTNTTAASGFVVLQDISCLR.HGD.SSS.PTIR......KSSQCRTAIGT..PVYITIT..ANVTDENYLHSSDLLMLSSCLFYASEMSEKGFKVVFGNVSGIVAVCINFTSYVQHVKEFTQR.SLVVDHVRLLH.FMTPETMRWATVLACLFAILLAI.
Q9ENK3_PRRSV/1-178                  ............................................................................MASSLLFLVVGFKCLLVSQAFACKPCFSSSLADIKTNTTAAAGFAVLQDISCLR.HRD.SAS.EAIR......KIPQCRTAIGT..PVYVTIT..ANVTDENYLHSSDLLMLSSCLFYASEMSEKGFKVVFGNVSGIVAVCVNFTSYVQHVKEFTQR.SLVVDHVRLLH.FMTPETMRWATVLACLFAILLAI.
A0A0B5JKI0_9NIDO/6-180              ..........................................................................vg--SALVFMLASNVHFSDAAAVLCTPCGA--VNATFANYTYLESFGHHQPYIAKA.TMDeHSS.ESSE......GACQFMYIGGV..VRSVNIS..VQAGFGSYAKQAHLLAFADCLLTAHDYIEHGIEVHVRLVKGVLSMCVNATE-TRHLEYLHFE.KLVNSKTK-YR.WLSPTAMRWATIISCVIAILLAV.
Q83021_LDV/6-175                    ...........................................................................v-HSTTLFILVGLECLLLSQALHCRPCYTKAVSVFNHSNIPLGNGLLMHTQGCHI.THK.KGG.----......-DP-CYTWIGQ..GEGVGIN..FNYTGAGHEHVANLVTLAACLIHAVELKETGFHPQFFNVSGHLAVCINFTEYVSHIQNKTWH.--EALKLRPAH.FLSPSVVKWGTVITLVLAILLAI.
A0A6B9PVZ4_9NIDO/1-181              ............................................................................MGSALLLLMASAVGIVGVAAIACRPCYGSHYIDTAKKDSQLTAPVPVHL-FC--.KQD.DEA.KKIQsdqakvGIRGVVCPVGD..QLAFKIQdvVELKDESSSASQDALFFTACLIHALDMAEHGFHPYFANCSGIPCTCVSITEWVAHVKNATGA.---PDHERGLFtKFTPHGLRWATVVTCVIAVLAA-w
#=GC seq_cons                       .............................................................................tushLFhlsuh.thhhutAhtC+PCautthsshtppso.hsshh.hps..C.h.ptc.ptu..t.p......t.sthhphlGs..shhhsIs..sNhostsascuucLLhhouCLhaAlEhpE+Gh+shFsNlSGhlslClNhT-aVtHlcphTtp.phsss+l+hh+.FlSPsulRWATVIsCllAILLAl.
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