#=GF ID Arteri_nsp7a
#=GF AC PF16749.9
#=GF DE Arterivirus nonstructural protein 7 alpha
#=GF AU Eberhardt R;0000-0001-6152-1369
#=GF SE PDB:2l8k
#=GF GA 27.00 27.00;
#=GF TC 89.60 88.60;
#=GF NC 26.00 25.60;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP Domain
#=GF RN [1]
#=GF RM 21561912
#=GF RT Structure and genetic analysis of the arterivirus nonstructural
#=GF RT protein 7alpha.
#=GF RA Manolaridis I, Gaudin C, Posthuma CC, Zevenhoven-Dobbe JC,
#=GF RA Imbert I, Canard B, Kelly G, Tucker PA, Conte MR, Snijder EJ;
#=GF RL J Virol. 2011;85:7449-7453.
#=GF DR INTERPRO; IPR031932;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC Nonstructural protein 7 alpha is likely to have a role in viral
#=GF CC RNA synthesis [1].
#=GF SQ 23
#=GS A0A0Y0BQ57_9NIDO/1797-1925 AC A0A0Y0BQ57.1
#=GS A0A089G1D3_9NIDO/1795-1923 AC A0A089G1D3.1
#=GS A0A089FYB2_9NIDO/1795-1923 AC A0A089FYB2.1
#=GS A0A0B6C113_9NIDO/1823-1951 AC A0A0B6C113.1
#=GS A0A0G2UPV3_9NIDO/1799-1927 AC A0A0G2UPV3.1
#=GS A0A159D6R9_9NIDO/1824-1952 AC A0A159D6R9.1
#=GS A0A167L705_9NIDO/1825-1953 AC A0A167L705.1
#=GS D7P3X5_EAV/1459-1580 AC D7P3X5.1
#=GS RPOA_PRRSL/2084-2213 AC Q04561.3
#=GS A0A1Z2RX77_9NIDO/1745-1874 AC A0A1Z2RX77.1
#=GS A0A2H4MWN4_9NIDO/2143-2272 AC A0A2H4MWN4.1
#=GS A0A0B5JKI4_9NIDO/1950-2079 AC A0A0B5JKI4.1
#=GS RPOA_PRRSB/2201-2330 AC Q8B912.3
#=GS A0A0Y0BX48_9NIDO/1797-1925 AC A0A0Y0BX48.1
#=GS Q9ENK6_PRRSV/2201-2330 AC Q9ENK6.1
#=GS A0A0B6CDG7_9NIDO/1819-1947 AC A0A0B6CDG7.1
#=GS D7P3X6_EAV/1459-1580 AC D7P3X6.1
#=GS A0A1Z2RX52_9NIDO/1745-1874 AC A0A1Z2RX52.1
#=GS RPOA_SHFV/1845-1973 AC Q68772.4
#=GS A0A6B9PQ75_9NIDO/2161-2290 AC A0A6B9PQ75.1
#=GS A0A0G2UIN6_9NIDO/1799-1927 AC A0A0G2UIN6.1
#=GS A0A0B5JQL5_9NIDO/1968-2097 AC A0A0B5JQL5.1
#=GS RPOA_EAVBU/1454-1575 AC P19811.3
A0A0Y0BQ57_9NIDO/1797-1925 LTGALAVNLSQDDLQFLNSLVNVKAFVSAQNLSSSLGEYIESRNARALRAQIAAVHASAAADNALSALDRFLTGAEPKLAAGDPVVLL.GTTN-KELVSAYAAGKEMIVQPVRSHKIGGTHCTLCTIVS--fv.....
A0A089G1D3_9NIDO/1795-1923 LTGALATQLSGEELTFLNSLTEIKAFVSAQNLQNAVNDYVASRQARALRAQLASVHASAAADHTLATLDKFLTSTEVTLKPGDPVVLL.GPAS-KEIIPVFSGSDEYIATPVRSQRVAGTVCTICKIIS--sa.....
A0A089FYB2_9NIDO/1795-1923 LTGALATQLSGEELTFLNSLTEIKAFVSAQNLQNAVNDYVASRQARALRAQLASVHASAAADHTLATLDKFLTSTEVTLKPGDPVVLL.GPAS-KEIIPVFSGSDEYIATPVRSQRVAGTVCTICKIIS--sa.....
A0A0B6C113_9NIDO/1823-1951 LSASLACNLSEEDLRFLDSLVDAKAVVAAVNTQAALKDYILSQNAKRLRSALATVHANANANKALASLDKFLAGTDTLLAPGDPVVLL.GCTN-QELITAYAGNKEYIVTPVRSHKVAGTVCTLCKVQAT-v......
A0A0G2UPV3_9NIDO/1799-1927 LSTALATTLSADDLKFLDAIAPCKAIVSAINVNQALNDYVLSNNSKRLRAALSAVHAHAGATKALASLDKFLTGHSTKLSASDPVLLL.GN-PKGDVVPIFTADAEYIAKPIRTHRVAGTNVTLCEVVAQ-v......
A0A159D6R9_9NIDO/1824-1952 LTAALAKTFSTEELSFLQACVPAKTFTCATNLSSTLDQYLKSQEIKNLRTALSTVSELAAGNSALARLDAFLTGQSTKLNPGDVVVHL.GLAG-TDIIETFVGGQIYLASPIQTSMVAGTKCTLCKII---gaa....
A0A167L705_9NIDO/1825-1953 LTAALAKNFSADELAFLDACAPAKCFTCAANLATTINQFIQSAEVKNLRAALSSVSTLSAGQQALARLDAFITGRPVDLCPGDVVVHL.GLVG-SDIFETYVGDKCFLAAPVQTALVAGTKCTLCKII---gqp....
D7P3X5_EAV/1459-1580 LTATLA-ALTDDDFQFLSDVLDCRAVRSAMNLRAALTSFQVAQYRNILNASLQVDRDAARSRRLMAKLADFA--VEQEVTAGDRVVVIdGLDHMAHFKG------DLVLVPLTTKVVGGSRCTICDVVKE-e......
RPOA_PRRSL/2084-2213 LTAALACKLSQADLDFLSSLTNFKCFVSASNMKNAAGQYIEAAYAKALRQELASLVQIDKMKGVLSKLEAFAETATPSLDIGDVIVLL.GQHPHGSILDINVGTERKTVSVQETRSLGGSKFSVCTVVSN-t......
A0A1Z2RX77_9NIDO/1745-1874 LAAVLAREFTDDELDYLRSVVDAKVIKSASNVRTAAANYIETSFAKALMTALSGVQCRVDASPFLARLSDFACGVTAVPEPGDKVLLL.GEHPNCVILETVFSGQVRRIQLTQTKIIAGTKVTE-------gvcvald
A0A2H4MWN4_9NIDO/2143-2272 LTAALAVRLSEDDLEFLKKLTDIKCFVSASNMRNAANQFIEAAYAKALRIELAQLVQVDAVKGVLAKLEAFADTAVPSLSPGDVVVLL.GNTPVGAMIDISVGATKHTVRVIETRVLAGSKMTVAQVA---elk....
A0A0B5JKI4_9NIDO/1950-2079 LTAALAINLSDADLDFLSTLVDARAVRSAKNMRTAAMDFANVSYAKALTNALHGVASFVHGHGLLARLDDFVNDVTTKLVPGDSCVVL.GRMAQDEVIPFEQDGEKLLVRCQAFRNVAGVQVSICDVLA--ae.....
RPOA_PRRSB/2201-2330 LTGALAMRLTDEDLDFLTKWTDFKCFVSASNMRNAAGQFIEAAYAKALRIELAQLVQVDKVRGTLAKLEAFADTVAPQLSPGDIVVAL.GHTPVGSIFDLKVGSTKHTLQAIETRVLAGSKMTVARVVDP-t......
A0A0Y0BX48_9NIDO/1797-1925 LTGALAVNLSQDDLQFLNSLVNVKAFVSAQNLSSSLGEYIESRNARALRAQIAAVHASAAADNALSALDRFLTGAEPKLAAGDPVVLL.GTTN-KELVSAYAAGKEMIVQPVRSHKIGGTHCTLCTIVS--fv.....
Q9ENK6_PRRSV/2201-2330 LTGALAMRLNDEDLDFLMKWTDFKCFVSASNMRNAAGQFIEAAYAKALRVELAQLVQVDKVRGTLAKLEAFADTVAPQLSPGDIVVAL.GHTPVGSIFDLKVGSTKHTLQAIETRVLAGSKMTVARVVDP-t......
A0A0B6CDG7_9NIDO/1819-1947 LSASLACNLSEEDLRFLDSLVDAKAVVAAVNTQAALKDYILSQNAKRLRSALATVHANANANKALASLDKFLAGTDTLLAPGDPVVLL.GCTN-QELITAYAGNKEYIVTPVRSHKVAGTVCTLCKVQAT-v......
D7P3X6_EAV/1459-1580 LTATLA-ALTDDDFQFLSDVLDCRAVRSAMNLRAALTSFQVAQYRNILNASLQVDRDAARSRRLMAKLADFA--VEQEVTAGDRVVVIdGLDHMAHFKG------DLVLVPLTTKVVGGSRCTICDVVKE-e......
A0A1Z2RX52_9NIDO/1745-1874 LAAVLAREFTDDELDYLRSVVDAKVIKSASNVRTAAANYIETSFAKALMTALSGVQCRVDASPFLARLSDFACGVTAVPEPGDKVLLL.GEHPNCVILETVFSGQVRRIQLTQTKIIAGTKVTE-------gvcvald
RPOA_SHFV/1845-1973 LSTALACALSEDELNFLAQAVDHKAIVSAIHVHKTLQDYILSKNAKILRASLASVHANHNASKALASLDKFLQGTSTQLKPGDPVILL.GSTS-AELVSVFSGDSEYIAEPIRSHPVAGTICTLCVVQAKC.......
A0A6B9PQ75_9NIDO/2161-2290 LTGALACKLNDDDLAFLTKLTDFKCFVSATNMRNAAQQYIEAAYAKALRIELSQLVQVDKMRGVLAKLEAFADTTTPSLSVGDVVVLL.GNTPVGCMFETMVGSVKHTVQVIETRTLAGTKMTVCKVVEP-q......
A0A0G2UIN6_9NIDO/1799-1927 LSTALATTLSADDLKFLDAIAPCKAIVSAINVNQALNDYVLSNNSKRLRAALSAVHAHAGATKALASLDKFLTGHSTKLSASDPVLLL.GN-PKGDVVPIFTADAEYIAKPIRTHRVAGTNVTLCEVVAQ-v......
A0A0B5JQL5_9NIDO/1968-2097 LTAALAINLSDADLDFLSTLVDARAVRSAKNMRTAAMDFANVSYAKALTNALHGVASFVHGHGLLARLDDFVNDVTTKLVPGDSCVVL.GRMAQDEVIPFEQDGEKLLVRCQAFRNVAGVQVSICDVLA--ae.....
RPOA_EAVBU/1454-1575 LTATLA-ALTDDDFQFLSDVLDCRAVRSAMNLRAALTSFQVAQYRNILNASLQVDRDAARSRRLMAKLADFA--VEQEVTAGDRVVVIdGLDRMAHFKD------DLVLVPLTTKVVGGSRCTICDVVKE-e......
#=GC seq_cons LTuALAhsLS--DLpFLsslsDsKAhVSApNlpsAlssYltup.AKsLRsuLusVpssssucpsLA+L-cFhssssspLsPGDsVVLL.Gpss.scllshhsuspchllpPlcT+hVAGT+sTlCcVls..s......
//
