GenomeNet

Database: Pfam
Entry: Asp4
LinkDB: Asp4
Original site: Asp4 
#=GF ID   Asp4
#=GF AC   PF16996.9
#=GF DE   Accessory secretory protein Sec Asp4
#=GF AU   Coggill P;0000-0001-5731-1588
#=GF SE   Pfam-B_7603 (release 27.0)
#=GF GA   27.70 27.70;
#=GF TC   29.00 28.80;
#=GF NC   25.50 25.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   23000954
#=GF RT   Emerging themes in SecA2-mediated protein export.
#=GF RA   Feltcher ME, Braunstein M;
#=GF RL   Nat Rev Microbiol. 2012;10:779-789.
#=GF DR   INTERPRO; IPR031551;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Asp4 and Asp5 are putative accessory components of the SecY2
#=GF CC   channel of the SecA2-SecY2 mediated export system, but they are
#=GF CC   not present in all SecA2-SecY2 systems. This family of Asp4 is
#=GF CC   found in Firmicutes [1].
#=GF SQ   6
#=GS A0A139NPI6_9STRE/5-59  AC A0A139NPI6.1
#=GS A3CM62_STRSV/3-57      AC A3CM62.1
#=GS A8AWV6_STRGC/3-57      AC A8AWV6.1
#=GS J0UVX5_STREE/3-41      AC J0UVX5.1
#=GS A0A4Q0VKA2_9LACO/6-62  AC A0A4Q0VKA2.1
#=GS A0A139NMD7_9STRE/5-59  AC A0A139NMD7.1
A0A139NPI6_9STRE/5-59             .NEDLFYKEVEGRMADLQQ..KAPEKEKKTGAERLNTLFSLALGLVILLGLLFTLLRM..
A3CM62_STRSV/3-57                 .KKDLFYKDIEGRLDELKH..GKPKKEKASLGENLNKAFVIVLGLMILIGLIFTLIG-a.
A8AWV6_STRGC/3-57                 .KKDLFYKDIEGRLDELKH..GRPKKEKASLGEKFNKAFVIALGLMILIGLIFTLIGV..
J0UVX5_STREE/3-41                 e-EDLFYKDVEGRMEELKQ..KPIKKEKKPEGKRLVRLFH------------------fy
A0A4Q0VKA2_9LACO/6-62             .KKDMLTHDISSRMKQEKRyvKVPARENETGGKALNITISVAIAIIVLAGILYPLV--sl
A0A139NMD7_9STRE/5-59             .KDDIFYKDIEGRMDELKR..KPPKKEKKTRAERISTFFSVSLGLVILIGLLFTLFRI..
#=GC seq_cons                     .KcDLFYKDIEGRM-ELK+..KsPKKEKcotGE+LNphFsluLGLhILlGLlFTLlt...
//
DBGET integrated database retrieval system