#=GF ID   Astro_capsid_p
#=GF AC   PF12226.12
#=GF DE   Turkey astrovirus capsid protein
#=GF AU   Assefa S;0000-0003-2178-533X
#=GF AU   Gavin OL;
#=GF SE   PFAM-B_2608 (release 23.0)
#=GF GA   25.00 25.00;
#=GF TC   25.60 25.20;
#=GF NC   24.40 24.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   16404992
#=GF RT   Molecular characterization of the capsid gene of two serotypes
#=GF RT   of turkey astroviruses.
#=GF RA   Tang Y, Murgia AM, Saif YM;
#=GF RL   Avian Dis. 2005;49:514-519.
#=GF DR   INTERPRO; IPR022027;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family of proteins is found in viruses. Proteins in this
#=GF CC   family are typically between 241 and 261 amino acids in length.
#=GF CC   These proteins are capsid proteins from various astrovirus
#=GF CC   strains.
#=GF SQ   4
#=GS A0A175WGZ2_9PEZI/451-582  AC A0A175WGZ2.1
#=GS G0PJ21_CAEBE/2-128        AC G0PJ21.1
#=GS CAPSD_HASV1/432-786       AC O12792.1
#=GS B2BW39_9GAMC/95-223       AC B2BW39.1
A0A175WGZ2_9PEZI/451-582             ...........................grvy------------------------------------------------------------------------------------------------------------------------------------------------------------------------VQPQWVWDSVndeELKSPELYAPGASLPPHLSPFVKPTQGQYDPTIPLEEQQTEAEAIDAELEDANEEqSGdDSEVENDMDVASEEEDEEEEGEEEEDGEFGGFDEEEEEGSEEEEEDVTLQR-----------------------------------------------------------------------------qrele...............
G0PJ21_CAEBE/2-128                   ............................tsl-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTK...SLAQQVYYLQIDVSQQLRTRLEEQADCKFVGPIKHRKMTSYIAKDRSVRLGEEKE.SE.EEEDSEKDKKADEEVETEGEEKEKEKKEEDEVHVKKEIRSEDEE------------------------------------------------------------------------------------gasltgllmpysrvqllngl
CAPSD_HASV1/432-786                  ...............................FKVVLTFGAPMSPNANNKQTWVNKPLDAPSGHYNVKIAKDVDHYLTMQGFTSIASVDWYTIDFQPSEAPAPIQGLQVLVNSSKKADVYAIKQFVTAQTNNKHQVTSLFLVKVTTGFQVNNYLSYFYRASATGDATTNLLVRGDTYTAGISFTQGGWYLLTNTSIVDGAMPPGWVWNNV...ELKTNTAYHMDKGLVHLIMPLPESTQMCYEMLTSIPRSRASGHGYESDN----TE.YL.DAPDSADQFKEDIETDTDIESTEDE-DEADRFDIIDT--SDEEDEN-ETDRVTLLSTLVNQGMTMTRATRIARRAFPTLSDRIKRGVYMDLLVSGASPGNAWSHACEEARKAAGEINPCTSGSRGHAE....................
B2BW39_9GAMC/95-223                  cdgigsdvgyengskspnekdkpfqsyfkfp----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...-------------------------------------------------------.--.-----------------EDSDSDNEDDDEPQEDLPDGYESDSGNTD---ERNMVFAALVTAGMDEDRAKYVTAQALPHRYFLCYDAYYHDFLVDGNGPAQANYEAKKWARRVC---------------sgksg...............
#=GC seq_cons                        ............................p.................................................................................................................................................................................ssh...pLtp..hYh..ts...hh..h.c.sphpa...h.h.c.ps.htt.cu......pE....-t.sptc..hts.E.-pEtEspEcEccEtsphDl.-p.tS--E-ps...pR.............................................................................ttp.t...............
//