#=GF ID Baculo_PEP_C
#=GF AC PF04513.16
#=GF DE Baculovirus polyhedron envelope protein, PEP, C terminus
#=GF AU Kerrison ND;0000-0002-1471-953X
#=GF SE DOMO:DM04337;
#=GF GA 38.00 38.00;
#=GF TC 38.00 38.00;
#=GF NC 37.90 37.80;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP Coiled-coil
#=GF RN [1]
#=GF RM 8176372
#=GF RT Orgyia pseudotsugata baculovirus p10 and polyhedron envelope
#=GF RT protein genes: analysis of their relative expression levels and
#=GF RT role in polyhedron structure.
#=GF RA Gross CH, Russell RL, Rohrmann GF;
#=GF RL J Gen Virol 1994;75:1115-1123.
#=GF DR INTERPRO; IPR007601;
#=GF DR SO; 0001080; coiled_coil;
#=GF CC Polyhedra are large crystalline occlusion bodies containing
#=GF CC nucleopolyhedrovirus virions, and surrounded by an
#=GF CC electron-dense structure called the polyhedron envelope or
#=GF CC polyhedron calyx. The polyhedron envelope (associated) protein
#=GF CC PEP is thought to be an integral part of the polyhedron
#=GF CC envelope. PEP is concentrated at the surface of polyhedra, and
#=GF CC is thought to be important for the proper formation of the
#=GF CC periphery of polyhedra. It is thought that PEP may stabilise
#=GF CC polyhedra and protect them from fusion or aggregation [1].
#=GF SQ 18
#=GS A5IZM1_9BBAC/160-318 AC A5IZM1.1
#=GS A0A551ZVK1_MICAE/1-99 AC A0A551ZVK1.1
#=GS A0A346TPY5_9ABAC/184-322 AC A0A346TPY5.1
#=GS Q9J889_9ABAC/183-321 AC Q9J889.1
#=GS Q461V3_9ABAC/186-325 AC Q461V3.1
#=GS O02179_NPVCF/141-279 AC O02179.1
#=GS P87582_GVCPM/161-294 AC P87582.2
#=GS Q1A4S8_GVCF/141-270 AC Q1A4S8.1
#=GS K4EQD7_9BBAC/179-259 AC K4EQD7.1
#=GS Q9IFJ4_9ABAC/191-330 AC Q9IFJ4.1
#=GS B0JKA2_MICAN/1-99 AC B0JKA2.1
#=GS A0A0E3URP9_9ABAC/234-373 AC A0A0E3URP9.1
#=GS A0A0M3N050_9ABAC/157-296 AC A0A0M3N050.1
#=GS Q0IKW1_NPVLS/188-327 AC Q0IKW1.1
#=GS I3XM71_NPVMB/166-308 AC I3XM71.1
#=GS A0A2H4UZY0_9ABAC/159-297 AC A0A2H4UZY0.1
#=GS Q8B9D1_NPVR1/165-309 AC Q8B9D1.1
#=GS VPHE_NPVAC/167-252 AC P24728.1
A5IZM1_9BBAC/160-318 ...........LAGVQELlnGGGGGGGTCDLTEVLADLQSLLTQV-GQIASDLAAIAGQLTAIGADVTSLSASVQTligdvnALVTTVNNLTTTVNTINanvETILNQLEGVDSNLATLLSQIAGLIQTINSLVSSVANI.....DTNLLSLTATVNANS-------qalaaltadvqlilsi.
A0A551ZVK1_MICAE/1-99 .......matf-------..-----------------------------------TENDLKELKDFIVGQFKEVND......KIDKSSEQLNGKIDRLS...EQLNSKIDKLSEEVNNLRVDIANIKGELTGVNKRLDNL.....EF--------------------tnrtifvaivaalmagl
A0A346TPY5_9ABAC/184-322 ...........LTNVNQL..TVTNANQHLELSNLLNAIRLQQTTIAAQVGQILETVEG-LGDLTGDFNRLLAEIDT......RLAALSTTLLNAINQLS...DQLRNELTGINSVLNNLSSSVTNINATLNNLLQAINGL.....NLGNVVAELQQTINTILELLE-t................
Q9J889_9ABAC/183-321 ...........LTSVNQL..TVTNANQHLELSNILNALRLQQTTIAGQVAQILETVEG-LGDITGDFTRLLAELDT......RLAALSTTILNAINQLS...DQLRNELTGINSVLNNLSSSVTNINATLNNLLQAINGL.....NLGTVVGELQQTINTILDLLQ-t................
Q461V3_9ABAC/186-325 ...........LSTLNQL..SLNNSNQHLELTNILNAIRLQNVAIAAQLTQLIETLDNQLGDLTTDLRRLLNELDT......RFAALTTALTNAIAQLQ...DSIRTDLTGINSILNNLTSSVTNINATLNNLLXAVNGL.....DIDGLTTLLNTILALLEEILG-i................
O02179_NPVCF/141-279 ...........VNGVNQI..SLNQSNQFLELSNALSALRAQNAQLLAAIEASKDALLARLNTLIDEIKNALPDLTS......QLEELAKELTDAINGVS...QTLRSELNNTNSILTNLASSITNINGTLNNLLVAVENI.....-EGGMSDADRQKLNDVLDLVT-e................
P87582_GVCPM/161-294 ..........l-LELQQL..INNGGGGTVDLTPVLDAI--------AALATQVTDLQTTLTDLQTALTQLAT----......DVGDLTTNIDTQLAALTtlvQDLSTAITNLQTDVTTLVNALPNIETALSGMINALNAF.....IAGAVAQWGADTWDTGAHPVD-sivn.............
Q1A4S8_GVCF/141-270 ylakiyqamqn-------..------NTTLLQTILNDVQQILNNGGGDFTTILDAITN-LTNLVTNLQNVLNTVTE......DLANLTTNLTDAVNSIT...----SVLDNLQRDVTNLN---TNTPLALSSIIAALNAF.....ISGSVAQWGADTWDTTTYPVP-t................
K4EQD7_9BBAC/179-259 ..........a-------..--------------------------------------------------------......ALSTIVTNLQSDANQAL...PALENTTNELQTSVNELLADVANIETALSNIINGLNAF.....KGGAVPQWGATTWNTDTYPL--adivn............
Q9IFJ4_9ABAC/191-330 ...........VSAVNQM..TLTNTNNFAEINNSLSTISLQNSTLTGQVARLLESVDRQLPLLLDRLNLLSSEVRQ......QLNQFSGQLAESLNRFQ...DVLRNELTGINSALNNLTSSVTNINVTLNNLLQAIAGT.....DFGEIGNVVRSLIDKVEQILKI.................
B0JKA2_MICAN/1-99 .......matf-------..-----------------------------------TENDLKELKDFIVGQFKEVND......KIDKSSEQLNGKIDRLS...EQLNSKIDKLSEEVNNLRVDIANIKGELTGVNKRLDNL.....EF--------------------tnrtifvaivaalmagl
A0A0E3URP9_9ABAC/234-373 ...........LNGLGQM..CINNTNQHLELSNLLTAIRLQNVTINGQLTQLLETLDSQLSTIVADVRVVLDRLDA......RFEALLVALESSLAKLQ...DVVRNELTGINSILNNLTSTVTNINCTLNNVLQAINAL.....NLDALTGNVEEIQNNVREILSI.................
A0A0M3N050_9ABAC/157-296 ...........VNTLNQL..SINSSNQNLEITNQLNAIRLQNITITGQLASILDILETQLGSITEDINRVLGDFTV......RLEALLAALNTTITQLQ...DTIRSELTNINAILGNLTSSVTNINATLNNILQALNNL.....NVGDLTAILNDIQANINQILEI.................
Q0IKW1_NPVLS/188-327 ..........g-NNITQL..TVNTTSQFLEVNNTLAAIRAQNVNILNQIANILDILDTRLNDISERLELLIVGLET......RLNGAITNLTDIVNRLQ...DTLRIEITALNSVIANLAASIGNMISTLNNIAQTLAGL.....NLDAILNLLSGLVEKIDAILDI.................
I3XM71_NPVMB/166-308 ...........LNNLNQL..TVNNANQHLELSNVLNAIRLQNVNIAAQIAQILDIVENQLGGIGGDIERLLAELDA......RFTALTNALTAAIAQLS...DQLRNELTNINSILNNLTSSVTNINATLNNLLQAINGL.....DIGDLITELTNTINTILNQLE-tilg.............
A0A2H4UZY0_9ABAC/159-297 .........na--TLNQL..ITTNNAQFLELNAAIAAIRLQNTTILQQLAAILALLETTLPGLSAQLAALTLDIDT......RFDALSAQLTLAVTQIQ...DTIRNELNGINSVLANLTAAIGNLTATINNLT-----L.....NFGNLETLLNQILTIVQTILD-tltpl............
Q8B9D1_NPVR1/165-309 ...........MSNVNQI..NLNQTNQFLELSNMMTGVRNQNVQLLAALETAKDVILTRLNTLLAEITDSLPDLTS......MLDKLAEQLLDAINTVQ...QTLRNELNNTNSILTNLASSVTNINGTLNNLLAAIENLiggggGGGNFNEADRQKLDLVYTLVN-e................
VPHE_NPVAC/167-252 ...........MSNVNQI..NLNQTNQFLELSNMMTGVRNQNVQLLAALETAKDVILTRLNTLLAEITDSLPDLTS......MLDKLAEQLLDAINTVQ...QTCA----------------------------------.....----------------------ts...............
#=GC seq_cons ...........hsslsQl..slssssQaLELoNhLsulR.Qpsplhuplsphl-sl-spLssLtsclsplls-lss......cLssLsssLssulsplp...-sLRs-LsslNShLsNLsuulsNIsuTLNNllpAlssL.....shGslsthhpphhspl.p.lp.p................
//
