#=GF ID   Birna_VP5
#=GF AC   PF03042.18
#=GF DE   Birnavirus VP5 protein
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Pfam-B_1772 (release 6.4)
#=GF GA   25.00 25.00;
#=GF TC   25.30 239.70;
#=GF NC   24.80 20.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Birnaviridae
#=GF RN   [1]
#=GF RM   7636493
#=GF RT   Characterization of the small open reading frame on genome
#=GF RT   segment A of infectious pancreatic necrosis virus. 
#=GF RA   Heppell J, Tarrab E, Berthiaume L, Lecomte J, Arella M; 
#=GF RL   J Gen Virol 1995;76:2091-2096.
#=GF DR   INTERPRO; IPR004284;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Birnaviruses are ds RNA viruses. Non structural protein VP5 is
#=GF CC   found in RNA segment A. The function of this small viral protein
#=GF CC   is unknown. The proteins are about 150 amino acids long and
#=GF CC   contain several conserved histidines and cysteines that might
#=GF CC   form a zinc binding site (Bateman A pers. obs.).
#=GF SQ   3
#=GS VP5_IBDVB/11-145  AC P0C751.1
#=GS VP5_IPNVJ/16-148  AC P22931.1
#=GS VP5_IBDVU/15-149  AC Q82634.1
VP5_IBDVB/11-145             SDDKPVRSNPADCSVHTEPSDANNRTGVHSGRHPGEAHSQVRDLDLQFDCGGHRVR--ANCLFPWIPWLNCGCSLHTAGQWE-LQVRSDAPDCPEPTGQLQLLQASESE-SHSEVKHTSWWRLCTKRHHKRRDLPRKPE
VP5_IPNVJ/16-148             MNHEHIQGNRNLLEIHYASREWASK---HSGRHNREAYTKTRDLVIQLR--GIRIRKWASCLLPRSSWIQGRCPLQVESEPDGTRIRPVARDVTGPKEGIQLRETDLTEIRHPELNPSR-WSVCTQWDPERCHLRRKSV
VP5_IBDVU/15-149             SDDKPARSNPTDCSVHTEPSDANNRTGVHSGRHPREAHSQVRDLDLQFDCGGHRVR--ANCLFPWLPWLNCGCSLHTAEQWE-LQVRSDAPDCPEPTGQLQLLQASESE-SHSEVKHTPWWRLCTKWHHKRRDLPRKPE
#=GC seq_cons                SDDKPlRSNPsDCSVHTEPSDANNRTGVHSGRHPREAHSQVRDLDLQFDCGGHRVR..ANCLFPWlPWLNCGCSLHTAuQWE.LQVRSDAPDCPEPTGQLQLLQASESE.SHSEVKHTsWWRLCTKWHHKRRDLPRKPE
//