#=GF ID Borrelia_P13
#=GF AC PF05628.16
#=GF DE Borrelia membrane protein P13
#=GF AU Moxon SJ;0000-0003-4644-1816
#=GF SE Pfam-B_8766 (release 8.0)
#=GF GA 25.00 25.00;
#=GF TC 25.40 27.90;
#=GF NC 23.90 24.20;
#=GF BM hmmbuild --amino HMM.ann SEED.ann
#=GF SM hmmsearch -E 1000 --cpu 4 -Z 75585367 HMM pfamseq
#=GF TP Family
#=GF RN [1]
#=GF RM 11292755
#=GF RT P13, an integral membrane protein of Borrelia burgdorferi, is
#=GF RT C-terminally processed and contains surface-exposed domains.
#=GF RA Noppa L, Ostberg Y, Lavrinovicha M, Bergstrom S;
#=GF RL Infect Immun 2001;69:3323-3334.
#=GF DR INTERPRO; IPR008420;
#=GF DR TC; 1.B.36;
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF CC This family consists of P13 proteins from Borrelia species. P13
#=GF CC is a 13kDa integral membrane protein which is
#=GF CC post-translationally processed at both ends and modified by an
#=GF CC unknown mechanism [1].
#=GF SQ 11
#=GS F0RZ86_SPHGB/78-223 AC F0RZ86.1
#=GS W6TEY3_9SPIR/40-171 AC W6TEY3.1
#=GS W6THW9_9SPIR/64-200 AC W6THW9.1
#=GS O50696_BORBU/58-190 AC O50696.1
#=GS Q9S011_BORBU/19-156 AC Q9S011.1
#=GS G8QU72_SPHPG/56-188 AC G8QU72.1
#=GS S3K2P0_TREMA/69-186 AC S3K2P0.1
#=GS F0RWP8_SPHGB/64-194 AC F0RWP8.1
#=GS Q73PB0_TREDE/67-197 AC Q73PB0.1
#=GS E7NUI3_TREPH/66-191 AC E7NUI3.1
#=GS H7C7R6_BORBU/37-179 AC H7C7R6.1
F0RZ86_SPHGB/78-223 .....la--LYEQAQI.SIAWPAFKNLL...A....GFGSGSKLQGDL-GGQLfgqIADWTAA.TTIGVGLGTYlid.....lffiQLFAASSNFD....DPLQDFAVGTMA...VGAIFLLTERVIQAVLPIPYGARYNKTLRNGLGVSKDG--------------..---------sdalsisvafvpgmqasqlgmk...
W6TEY3_9SPIR/40-171 ......m-LFYKANKK.DVLAPFLLNFF...F....GFGIGSFVQGDITGGLL...VLGSEIL.GLGLVVSGMC............--------LR....SPGTPLGFSLIS...LGGITLFATRIAEMIIPFTYASSYNKKLQEKLGVVLGGFKPQFEANFNENAGlsFELAFTKKY.........................
W6THW9_9SPIR/64-200 .......LLLYESYKQ.NALIPFLLNLF...V....GFGIGSLVQGDITGGLL...ILGFDAL.SLGLLGYGVY............---STLNSKS....VEVPVVGLSLMT...LGGITMFVTRIVEVVLPFTHAASYNKKLRQNLGIALGGFHPEVDLSFDENSRviFELSFTKKY.........................
O50696_BORBU/58-190 .......LLQYEKEQLiDLWIPVMLNLF...L....PFGVGSFVQGDYIGGGC...TLGFNLL.GLTLLTTGVI............---QMKNLKK....EPASISSMILLL...SGMLTFGSSYLISIYLPVLFEDRYYKNLMNRIIDELAGFEPNLDIGMNG---..FQLSFKKSY.........................
Q9S011_BORBU/19-156 .......VMKYESKKA.TILAPLLLNIF...L....SLGIGSFVQGDYIGGGA...LLGSQVL.GGILIMAGYM............TGDIGFVTES....TATVITGGVLSG...IGGLTIAASYITGIIIPFKFANRYNADLKKRLGIALAGLEPNFDIGINGDSN..YRLKNPIEY.........................
G8QU72_SPHPG/56-188 msifsmh-------ES.SPTLPFVVNLL...V....GAGIGSFIQGDSKGGFT...ALITEVV.GVGLYAAGYA............SVYSTASLDG....EL-SAGGSALML...LGVGALLGGRIYEWIRPFSYSKQYNNQLHSAL--------------------..---------lgktevlitpvvtavnnqmalgmvg
S3K2P0_TREMA/69-186 .....al---YKKGKT.DALPSVALNAFsffIgippNLGIGSFVQHDTAGGLI...NLGTGLA.GIGCITSGLI............--L--F--KT....NPD-TAAALFVS...GGALCLG-SWIFGIVRPIVFASSHNKKLEDALL-------------------..---------lktkvtlvpa...............
F0RWP8_SPHGB/64-194 ......n-IVYESNKQ.TTTTPLVLNLL...L....GCGIGSFVQGDTYGGTM...GLVLDLL.STTLFYTGYM............QSLEASTR-W....SSDGTEGSELII...MGAAMMLGSKIGQLIRPFIYANEYNKNLSSALM-------------------..---------svsmvpvmdqnkefgmrvaani...
Q73PB0_TREDE/67-197 ....lli---QKKYQK.DLAVPLLLNGF...V....GFGSGNFACGDMLGGGI...HAAIDGL.SVLSMLTMQFinlvdlfsttssDPLASIANID....RRMKIFSYVAYS...AGSI-MLVNRIASLITASLYVKRYNQTLNDVLIKK-----------------..---------ipkvsftp.................
E7NUI3_TREPH/66-191 .llnrnt--------L.SLDIPMLLNGV...I....GFGSGSFVNKDYIAGGI...HCGIDVAcTITSITVGYL............YSTRMMNSATsydsDKMLKDTKIVLYtaiTGFSVLAINKIAQLITLPVYTNKYNAALHDAL--------------------..---------lgqgvaakkpv..............
H7C7R6_BORBU/37-179 .......LLVYETSKQ.DPIVPFLLNLF...L....GFGIGSFAQGDILGGSL...ILGFDAV.GIGLILAGAYl.........diKALDGITKKA....AFQWTWGKGVML...AGVVTMAVTRLTEIILPFTFANSYNRKLKNSLNVALGGFEPSFDVAMGQSSAlgFELSFKKSY.........................
#=GC seq_cons ..........Ycptcp.shhhPhlLNlF...l....GFGIGSFVQGDhhGGtl...hLGh-ll.ulsLlssGhh..............htshspts....s.h.shuhslhh...hGulshhso+IsplIhPhsauspYN+pLcssLh.......................................................
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