GenomeNet

Database: Pfam
Entry: BppU-like_C
LinkDB: BppU-like_C
Original site: BppU-like_C 
#=GF ID   BppU-like_C
#=GF AC   PF21470.1
#=GF DE   Minor structural protein 5-like, C-terminal domain
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Lazaro Pinto Beatriz;0000-0001-6837-2941
#=GF SE   ECOD:EF24481
#=GF GA   27.00 27.00;
#=GF TC   27.30 113.20;
#=GF NC   26.80 26.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Domain
#=GF RC   Paper describing PDB structure 5e7t
#=GF RN   [1]
#=GF RM   26814179
#=GF RT   The Atomic Structure of the Phage Tuc2009 Baseplate Tripod
#=GF RT   Suggests that Host Recognition Involves Two Different
#=GF RT   Carbohydrate Binding Modules.
#=GF RA   Legrand P, Collins B, Blangy S, Murphy J, Spinelli S, Gutierrez
#=GF RA   C, Richet N, Kellenberger C, Desmyter A, Mahony J, van Sinderen
#=GF RA   D, Cambillau C;
#=GF RL   mBio. 2016;7:e01781-e01715.
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is found at the C-terminal end of Minor structural
#=GF CC   protein 5 from Lactococcus phage Tuc2009 (BppU) and similar
#=GF CC   proteins from tailed bacteriophages and prophages found mostly
#=GF CC   in firmicutes. BppU is a viral baseplate component. This domain
#=GF CC   folds into a structure formed mostly by beta-strands [1].
#=GF SQ   8
#=GS Q9AYV4_BPTU2/204-262      AC Q9AYV4.1
#=GS B5SP44_9CAUD/195-253      AC B5SP44.1
#=GS A0A1P8BKY0_9CAUD/212-270  AC A0A1P8BKY0.1
#=GS A0A649V1C0_9CAUD/179-237  AC A0A649V1C0.1
#=GS A0A649V0X4_9CAUD/179-237  AC A0A649V0X4.1
#=GS Q8LTP8_9CAUD/221-279      AC Q8LTP8.1
#=GS A0A1P8BKT3_9CAUD/220-276  AC A0A1P8BKT3.1
#=GS A0A1P8BKL5_9CAUD/223-281  AC A0A1P8BKL5.1
Q9AYV4_BPTU2/204-262                 PKFVGTYVDTNPVSSTVSSKYDWDEMKYRVYLDGTPVGGSKLLSFDLENLKAGTSYNVQ..
B5SP44_9CAUD/195-253                 PKYVGTYVDTNPTSSMEPSKYDWDEMKYRVYLDGVPVGGSKLLSFDLENLKAGTSYNVQ..
A0A1P8BKY0_9CAUD/212-270             PKYVGTYVDTNPVSSTVSSKYDWDEMKYRVYLDGVPVGGSKLLSFDLENLTSGTTYNVQ..
A0A649V1C0_9CAUD/179-237             PKYVGTYVDTNPVSSTNSSKYDWDEMKYRVYLDGVPVGGSKLLSFDLENLKAGTSYNVQ..
A0A649V0X4_9CAUD/179-237             PKYVGTYVDTNPVSSTNSSKYDWDEMKYRVYLDGVPVGGSKLLSFDLENLKAGTSYNVQ..
Q8LTP8_9CAUD/221-279                 PKFVGTYVDTNQTSSTEPSKYDWDEMKYRVYLDGVPVGGSKLLSFDLENLKAGTSYNVQ..
A0A1P8BKT3_9CAUD/220-276             PKYVGTYVDTNPVSSTVSSKYDWDEMKYRVYLDGVPVGGSKLLSFDLENLTSGTT----tl
A0A1P8BKL5_9CAUD/223-281             PKFVGTYVDTNQTSSTEPSKYDWDEMKYRVYLDGTPVGGSKLLSFDLENLKAGTSYNVQ..
#=GC seq_cons                        PKYVGTYVDTNPVSSTsSSKYDWDEMKYRVYLDGVPVGGSKLLSFDLENLKAGTSYNVQ..
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