GenomeNet

Database: Pfam
Entry: CAP18_C
LinkDB: CAP18_C
Original site: CAP18_C 
#=GF ID   CAP18_C
#=GF AC   PF12153.12
#=GF DE   LPS binding domain of CAP18 (C terminal)
#=GF AU   Mistry J;0000-0003-2479-5322
#=GF AU   Gavin OL;
#=GF SE   pdb_1lyp
#=GF GA   20.50 20.50;
#=GF TC   20.50 20.70;
#=GF NC   20.10 19.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   7649303
#=GF RT   The solution structure of the active domain of CAP18--a
#=GF RT   lipopolysaccharide binding protein from rabbit leukocytes.
#=GF RA   Chen C, Brock R, Luh F, Chou PJ, Larrick JW, Huang RF, Huang TH;
#=GF RL   FEBS Lett. 1995;370:46-52.
#=GF DR   INTERPRO; IPR022746;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain family is found in eukaryotes, and is approximately
#=GF CC   30 amino acids in length, and the family is found in association
#=GF CC   with Pfam:PF00666. CAP18 is a protein which is derived from
#=GF CC   rabbit granulocytes. It has two domains, an N terminal DUF and a
#=GF CC   C terminal Gram negative LPS binding domain. This domain is the
#=GF CC   C terminal domain.
#=GF SQ   106
#=GS CAMP_MACFA/136-163        AC Q1KLX7.1
#=GS A0A6J3JG38_SAPAP/139-166  AC A0A6J3JG38.1
#=GS A0A8C9GE46_9PRIM/139-166  AC A0A8C9GE46.1
#=GS A0A673U244_SURSU/751-778  AC A0A673U244.1
#=GS A0A1U7QJA2_MESAU/142-168  AC A0A1U7QJA2.1
#=GS A0A6P6H8M8_PUMCO/137-164  AC A0A6P6H8M8.1
#=GS A0A4V2JBA3_9FLAO/7-24     AC A0A4V2JBA3.1
#=GS A0A811Z953_NYCPR/137-164  AC A0A811Z953.1
#=GS A0A8J6KUW2_MICOH/141-167  AC A0A8J6KUW2.1
#=GS A0A2K6RID8_RHIRO/139-166  AC A0A2K6RID8.1
#=GS G8F302_MACFA/139-166      AC G8F302.1
#=GS G1R3M3_NOMLE/139-166      AC G1R3M3.2
#=GS A0A0D9RTQ0_CHLSB/139-166  AC A0A0D9RTQ0.1
#=GS A0A6P3IH59_BISBI/138-164  AC A0A6P3IH59.1
#=GS A0A2R9CDL0_PANPA/139-166  AC A0A2R9CDL0.1
#=GS J3KNB4_HUMAN/139-166      AC J3KNB4.1
#=GS A0A5N3VVL6_MUNRE/139-164  AC A0A5N3VVL6.1
#=GS A0A4Y2P8X7_ARAVE/50-71    AC A0A4Y2P8X7.1
#=GS CAMP_PANTR/136-163        AC Q1KLX1.1
#=GS A0A2K6M563_RHIBE/139-166  AC A0A2K6M563.1
#=GS A0A667GQ46_LYNCA/137-164  AC A0A667GQ46.1
#=GS A0A1P8FFW0_9PROT/37-56    AC A0A1P8FFW0.1
#=GS A0A7J8DA39_MOLMO/133-160  AC A0A7J8DA39.1
#=GS A0A8D2DCL8_SCIVU/138-165  AC A0A8D2DCL8.1
#=GS A0A6I9LNS4_PERMB/144-170  AC A0A6I9LNS4.1
#=GS A0A8C5YSY5_MARMA/115-142  AC A0A8C5YSY5.1
#=GS A0A2K5RWP0_CEBIM/139-166  AC A0A2K5RWP0.1
#=GS I3MP90_ICTTR/137-163      AC I3MP90.1
#=GS A0A8C6QJ84_NANGA/141-167  AC A0A8C6QJ84.1
#=GS A0A3Q7RK90_VULVU/137-164  AC A0A3Q7RK90.1
#=GS A0A8C0L6S8_CANLU/137-164  AC A0A8C0L6S8.1
#=GS A0A2U3XNL1_LEPWE/137-164  AC A0A2U3XNL1.1
#=GS A0A8C9KDH3_PANTA/118-145  AC A0A8C9KDH3.1
#=GS G3V8S9_RAT/142-168        AC G3V8S9.1
#=GS A0A8B7GT92_MICMU/140-157  AC A0A8B7GT92.1
#=GS B9TUC7_BOSIN/138-164      AC B9TUC7.1
#=GS A0A2K6E9K8_MACNE/139-166  AC A0A2K6E9K8.1
#=GS H2PAV4_PONAB/139-166      AC H2PAV4.3
#=GS A0A7G6E808_9FIRM/397-414  AC A0A7G6E808.1
#=GS A0A8C5P3C0_JACJA/140-166  AC A0A8C5P3C0.1
#=GS A0A671ENA0_RHIFE/137-164  AC A0A671ENA0.1
#=GS A0A8C8XEB5_PANLE/170-197  AC A0A8C8XEB5.1
#=GS CAMP_CALJA/136-163        AC Q1KLY4.1
#=GS CAMP_MOUSE/140-166        AC P51437.2
#=GS CTHL7_BOVIN/138-164       AC P56425.1
#=GS A0A2J8PA57_PANTR/139-166  AC A0A2J8PA57.1
#=GS A0A2U3VV05_ODORO/136-163  AC A0A2U3VV05.1
#=GS CAMP_MACMU/136-163        AC Q9GLV5.1
#=GS A0A8C9P8V2_SPEDA/133-160  AC A0A8C9P8V2.1
#=GS A0A1S3WQ01_ERIEU/145-172  AC A0A1S3WQ01.1
#=GS A0A2K6UXA1_SAIBB/138-165  AC A0A2K6UXA1.1
#=GS A0A8C8ZH53_PROSS/140-158  AC A0A8C8ZH53.1
#=GS A0A8C6FUT3_MOSMO/139-164  AC A0A8C6FUT3.1
#=GS G1T9L4_RABIT/137-164      AC G1T9L4.1
#=GS CAMP_HUMAN/136-163        AC P49913.1
#=GS A0A4W2DQY9_BOBOX/223-249  AC A0A4W2DQY9.1
#=GS L8HR30_9CETA/138-164      AC L8HR30.1
#=GS A0A2Y9R4G3_TRIMA/135-162  AC A0A2Y9R4G3.1
#=GS A0A2K5KGL9_COLAP/139-166  AC A0A2K5KGL9.1
#=GS F7B5V0_MACMU/139-166      AC F7B5V0.1
#=GS A0A2K6GW17_PROCO/140-158  AC A0A2K6GW17.1
#=GS A0A6J1XPG6_ACIJB/137-164  AC A0A6J1XPG6.1
#=GS A0A6P6DXP2_OCTDE/132-159  AC A0A6P6DXP2.1
#=GS A0A5E4ACJ9_MARMO/190-217  AC A0A5E4ACJ9.1
#=GS A0A340WFD3_LIPVE/137-163  AC A0A340WFD3.1
#=GS A0A8D2HWL9_UROPR/147-174  AC A0A8D2HWL9.1
#=GS A0A2K5L5R1_CERAT/139-166  AC A0A2K5L5R1.1
#=GS A0A8D2JYX6_THEGE/139-166  AC A0A8D2JYX6.1
#=GS P79360_SHEEP/138-164      AC P79360.1
#=GS A0A8B9YF30_BOSMU/138-164  AC A0A8B9YF30.1
#=GS A0A3Q7Q538_CALUR/136-163  AC A0A3Q7Q538.1
#=GS A0A2Y9D6N3_TRIMA/137-164  AC A0A2Y9D6N3.1
#=GS A0A6J0ZBV9_ODOVR/139-164  AC A0A6J0ZBV9.1
#=GS A0A8C6FUL6_MOSMO/138-163  AC A0A8C6FUL6.1
#=GS A0A816C3Y3_9BILA/158-184  AC A0A816C3Y3.1
#=GS A0A250YB41_CASCN/138-165  AC A0A250YB41.1
#=GS A0A2K5E698_AOTNA/139-166  AC A0A2K5E698.1
#=GS A0A7J7WC85_PIPKU/163-186  AC A0A7J7WC85.1
#=GS A0A673UAJ7_SURSU/171-198  AC A0A673UAJ7.1
#=GS CAP18_RABIT/137-164       AC P25230.1
#=GS A0A2K5TIY0_GORGO/139-166  AC A0A2K5TIY0.1
#=GS A0A8C6H0U3_MUSSI/140-166  AC A0A8C6H0U3.1
#=GS H0WLW9_OTOGA/137-164      AC H0WLW9.1
#=GS A0A452E555_CAPHI/138-164  AC A0A452E555.1
#=GS CAMP_NOMLE/136-163        AC Q1KLX9.1
#=GS A0A096N3S1_PAPAN/138-165  AC A0A096N3S1.3
#=GS A0A8C6FUJ4_MOSMO/138-163  AC A0A8C6FUJ4.1
#=GS Q6TN20_CANLF/137-164      AC Q6TN20.1
#=GS F1C962_FELCA/137-164      AC F1C962.1
#=GS CAMP_GORGO/136-163        AC Q1KLY3.1
#=GS A0A5E4ABE5_MARMO/138-165  AC A0A5E4ABE5.1
#=GS A0A8H5BQP6_9AGAR/116-142  AC A0A8H5BQP6.1
#=GS A0A6I9K0K0_CHRAS/135-162  AC A0A6I9K0K0.1
#=GS A0A8C9PC22_SPEDA/136-163  AC A0A8C9PC22.1
#=GS A0A1S3AEB2_ERIEU/147-174  AC A0A1S3AEB2.1
#=GS A0A8B7QE59_HIPAR/142-169  AC A0A8B7QE59.1
#=GS A0A6G1AHC9_CROCR/137-164  AC A0A6G1AHC9.1
#=GS A0A8B7AQI5_ORYAF/137-164  AC A0A8B7AQI5.1
#=GS W5NT47_SHEEP/138-165      AC W5NT47.1
#=GS G1L3J9_AILME/136-163      AC G1L3J9.2
#=GS A0A1A6GYB1_NEOLE/142-168  AC A0A1A6GYB1.1
#=GS A0A1S3G4U2_DIPOR/134-161  AC A0A1S3G4U2.1
#=GS A0A7J8HNI9_ROUAE/129-155  AC A0A7J8HNI9.1
#=GS A0A2K5ZF24_MANLE/139-166  AC A0A2K5ZF24.1
#=GS A0A455X2E0_9PROT/35-61    AC A0A455X2E0.1
#=GS U3EI75_CALJA/139-166      AC U3EI75.1
CAMP_MACFA/136-163                   ...GNFFRKVKEKIGGGLKKVGQKIKDFLGN...
A0A6J3JG38_SAPAP/139-166             ...GGFLQKAREKIARGFKKIGQKINDFLGK...
A0A8C9GE46_9PRIM/139-166             ...GNFFRKAKEKIGRGLKKIGQKIKDFWGN...
A0A673U244_SURSU/751-778             ...RDLIKKGGQKIGEKIQRIGERIHDFFTN...
A0A1U7QJA2_MESAU/142-168             ...-ELLRKGGLKIGENFKKIGQKIKDFFQK...
A0A6P6H8M8_PUMCO/137-164             ...GELIQRGGQKIGEKIQNIGQRIRDFFSN...
A0A4V2JBA3_9FLAO/7-24                .ts------GGEKITEKLEKIG---------sik
A0A811Z953_NYCPR/137-164             ..k-ELITTGGQKIGEKIRRIGQRIKDFFKN...
A0A8J6KUW2_MICOH/141-167             ...-GLLRRGGLKIGEKIQKLGQKIRDFFQK...
A0A2K6RID8_RHIRO/139-166             ...GNFFRKAKEKIGGGLKKIGQKIKDFLGN...
G8F302_MACFA/139-166                 ...GNFFRKVKEKIGGGLKKVGQKIKDFLGN...
G1R3M3_NOMLE/139-166                 ...GNFFRKAREKIGKEFKRIVQRIKDFLQ-h..
A0A0D9RTQ0_CHLSB/139-166             ...GKFFRKVKKKIGGGLKKIGQKIKDFLGN...
A0A6P3IH59_BISBI/138-164             ...RDSIWRGQQKILEKARRIGERIKDIFR-...
A0A2R9CDL0_PANPA/139-166             ...GDFFRKSKEKIGKEFKRIVQRIKDFLRN...
J3KNB4_HUMAN/139-166                 ...GDFFRKSKEKIGKEFKRIVQRIKDFLRN...
A0A5N3VVL6_MUNRE/139-164             ..d--KIRRGGQKILDKVKRIGQRTRYFF--y..
A0A4Y2P8X7_ARAVE/50-71               ..a---LRAAINKFGEDIEKICQRIKE----...
CAMP_PANTR/136-163                   ...GDFFRKSKEKIGKEFKRIVQRIKDFLRN...
A0A2K6M563_RHIBE/139-166             ...GNFFRKAKEKIGGGLKKIGQKIKDFFGN...
A0A667GQ46_LYNCA/137-164             ...GELIQQGGQKIVEKIQKIGQRIRDFFSN...
A0A1P8FFW0_9PROT/37-56               ..n------AVEKAGEKIEKAGDKIKD----a..
A0A7J8DA39_MOLMO/133-160             ...GGLLKKGGQIIGKKIEKIGKRIKDFFTN...
A0A8D2DCL8_SCIVU/138-165             ...GRLLQRGGEKFGEKLEKIGRKIKDFFQ-s..
A0A6I9LNS4_PERMB/144-170             ...-GLLRKGGQKIGEKIKKIGQKIADFFGK...
A0A8C5YSY5_MARMA/115-142             ...GGLLQKGGEKIGEKLENIGRKIKDFFQ-s..
A0A2K5RWP0_CEBIM/139-166             ...GGFLRKATEKIGRGFKKIGQKINDFLGK...
I3MP90_ICTTR/137-163                 ...GGLLQKGGEKIGEKLENIGRKIKDFFQ-...
A0A8C6QJ84_NANGA/141-167             ...-GLLRKGGLKIGEKIQKIGQKIQDFFQK...
A0A3Q7RK90_VULVU/137-164             ..k-ELITTGVQKIGKKIRRIGQRIKDILKN...
A0A8C0L6S8_CANLU/137-164             ..k-ELITTGGQKIGKKIRRIGQRIKDFLKN...
A0A2U3XNL1_LEPWE/137-164             ...RDLIRRGRQKIGRRINRLGRRIQDILKN...
A0A8C9KDH3_PANTA/118-145             ...GELIQQGGQKIGEKIQKIGERIRDFFSN...
G3V8S9_RAT/142-168                   ...-GLLRKGGEKFGEKLRKIGQKIKDFFQK...
A0A8B7GT92_MICMU/140-157             ...----------IRGKLEKLGQRIRDFFNN...
B9TUC7_BOSIN/138-164                 ...RDSIRRGQQKILEKARRIGERIKDIFR-...
A0A2K6E9K8_MACNE/139-166             ...GNFFRKVKEKIGGGLKKVGQKIKDFLGN...
H2PAV4_PONAB/139-166                 ...GDFFRKAREKIGEEFKRIVQRIKDFLRN...
A0A7G6E808_9FIRM/397-414             elw------------EKLENIGKKIKEFFG-...
A0A8C5P3C0_JACJA/140-166             ...-ELLKKGGRKIGENLKKIGQRLQNFFQK...
A0A671ENA0_RHIFE/137-164             ...REIIRKGGRKIGQGLENIGKRIKDFFSN...
A0A8C8XEB5_PANLE/170-197             ...GELIQRGGQKIGEKIQKIGERIRDFFSN...
CAMP_CALJA/136-163                   ...GDILQKAREKIEGGLKKLVQKIKDFFGK...
CAMP_MOUSE/140-166                   ...-GLLRKGGEKIGEKLKKIGQKIKNFFQK...
CTHL7_BOVIN/138-164                  ...RDSIRRGQQKILEKARRIGERIKDIFR-...
A0A2J8PA57_PANTR/139-166             ...GDFFRKSKEKIGKEFKRIVQRIKDFLRN...
A0A2U3VV05_ODORO/136-163             ...RDLIRRGGQKIAEKFQRIGEQINDIFRN...
CAMP_MACMU/136-163                   ...GNFFRKVKEKIGGGLKKVGQKIKDFLGN...
A0A8C9P8V2_SPEDA/133-160             ...GGLLQKGGEKIGEKLENIGRKIKDFFQ-s..
A0A1S3WQ01_ERIEU/145-172             ...RDLIKKGTQKIGRKLRKVGQQIKDFIRN...
A0A2K6UXA1_SAIBB/138-165             ..g-SILQKAGEKIGGGLKKIGQKIKDFFGK...
A0A8C8ZH53_PROSS/140-158             ..f----------IQRKFEKIGQRIRDFFQN...
A0A8C6FUT3_MOSMO/139-164             ...-DSLRRGGRKILGKVKSIGQRIKDIFR-...
G1T9L4_RABIT/137-164                 ...RKRLRKFRNKIKEKLKKIGQKIQGLLPK...
CAMP_HUMAN/136-163                   ...GDFFRKSKEKIGKEFKRIVQRIKDFLRN...
A0A4W2DQY9_BOBOX/223-249             ...RDSIRRGQQKILEKARRIGERIKDIFR-...
L8HR30_9CETA/138-164                 ...RDSIWRGQQKILEKARRIGERIKDIFR-...
A0A2Y9R4G3_TRIMA/135-162             ...GRLIRKGGEKIGKKIERVGQRIKEFFEK...
A0A2K5KGL9_COLAP/139-166             ...GNFFRKAKEKIGGELKKIGQKIKDFLGN...
F7B5V0_MACMU/139-166                 ...GNFFRKVKEKIGGGLKKVGQKIKDFLGN...
A0A2K6GW17_PROCO/140-158             ..f----------IQRKLEKIGERIREFFQN...
A0A6J1XPG6_ACIJB/137-164             ...GELIQRGGQKIGEKIQNIGQRIRDFFSN...
A0A6P6DXP2_OCTDE/132-159             ...GKLLRKVVQKLKEKFKKISQKIKDFIYN...
A0A5E4ACJ9_MARMO/190-217             ...GGLLQKGGEKIGEKLENIGRKIKDFFQ-s..
A0A340WFD3_LIPVE/137-163             ...GDFLQRGXEKIGKKTERIGQRIKDIFG-...
A0A8D2HWL9_UROPR/147-174             ...GGLLKKGGEKIGEKLENIGRKIKDFFQ-s..
A0A2K5L5R1_CERAT/139-166             ...GNFFRKVKEKIGGGLKKVGQKIKDFLGN...
A0A8D2JYX6_THEGE/139-166             ...GNFFRKVKKKIGGGLKKVGQKIKDFLGN...
P79360_SHEEP/138-164                 ...RDSLQRGGQKILEKAERIGDRIKDIFR-...
A0A8B9YF30_BOSMU/138-164             ...RDSIWRGQQKILEKARRIGERIKDIFR-...
A0A3Q7Q538_CALUR/136-163             ...RDLIRRGRQKIAEKIQRIGQQINNIFRK...
A0A2Y9D6N3_TRIMA/137-164             ...GRLIRKGGEKIGKKIERVGQRIKEFFEK...
A0A6J0ZBV9_ODOVR/139-164             .dk---IRSGGQKILGKVQRIGERIRDFF--t..
A0A8C6FUL6_MOSMO/138-163             ...-DSLRRGGRKILGKVKSIGQRIKDIFR-...
A0A816C3Y3_9BILA/158-184             ..k-EFFRKLWNWIKEAFQNIAQKVKDFF--e..
A0A250YB41_CASCN/138-165             ...GSFLQRGGQKTGEKLERLGQKIKDFFQN...
A0A2K5E698_AOTNA/139-166             ..g-SILRKAGEKIGGGLKKIGQRIKDFFGK...
A0A7J7WC85_PIPKU/163-186             ...GKLLQKGGQKLGE----IGQRIRDFFSN...
A0A673UAJ7_SURSU/171-198             ...RDLIKKGGQKIGEKIQRIGERIHDFFTN...
CAP18_RABIT/137-164                  ...RKRLRKFRNKIKEKLKKIGQKIQGFVPK...
A0A2K5TIY0_GORGO/139-166             ...GDFFRKAKEKIGKESKRIVQRIKDFLRN...
A0A8C6H0U3_MUSSI/140-166             ...-GLLRKGGEKIGEKLKKIGQKIKNFFQK...
H0WLW9_OTOGA/137-164                 ...GGFLRRGVEEFGRKLENIGRKIKEFFQN...
A0A452E555_CAPHI/138-164             ...RDSLRRGGQKILEKVERIGDRIKDIFR-...
CAMP_NOMLE/136-163                   ...GNFFRKAREKIGKEFKRIVQRIKDFLQ-h..
A0A096N3S1_PAPAN/138-165             ...GNFFRKVKEKIGGGLKKVGQKIKDFLGN...
A0A8C6FUJ4_MOSMO/138-163             ...-DSLRRGGRKILGKVKSIGQRIKDIFR-...
Q6TN20_CANLF/137-164                 ..k-ELITTGGQKIGEKIRRIGQRIKDFFKN...
F1C962_FELCA/137-164                 ...GELIQQGGQKIVEKIQKIGQRIRDFFSN...
CAMP_GORGO/136-163                   ...GDFFRKAKEKIGKESKRIVQRIKDFLRN...
A0A5E4ABE5_MARMO/138-165             ...GGLLQKGGEKIGEKLENIGRKIKDFFQ-s..
A0A8H5BQP6_9AGAR/116-142             ..g--AFQHAGQKIKEGFQHVGQKIKEGF--hk.
A0A6I9K0K0_CHRAS/135-162             ...GELLRRGGQKIGEKIERIGQRIKGFFQN...
A0A8C9PC22_SPEDA/136-163             ...GGLLQKGGEKIGEKLENIGRKIKDFFQ-s..
A0A1S3AEB2_ERIEU/147-174             ...RDLIKKGTQKIGRKLRKVGQQIKDFIRN...
A0A8B7QE59_HIPAR/142-169             ...RDLLRRGGRKIGQGLERIGQRIQGFFSN...
A0A6G1AHC9_CROCR/137-164             ...GELIKRGGQKIAQKIERIGQRIHDFFEN...
A0A8B7AQI5_ORYAF/137-164             ...GGLLQRGGKRIGEKIERIGQRIKDFFQN...
W5NT47_SHEEP/138-165                 ...RDSLQRGGQKILEKAERIGDRIKDIFR-t..
G1L3J9_AILME/136-163                 ...RNLIEKAGQNIRGKIQGIGRRIKDILKN...
A0A1A6GYB1_NEOLE/142-168             ...-GLLRKGGQMIGEKLKKIGQRIKEFFEK...
A0A1S3G4U2_DIPOR/134-161             ...GKFLRKGGKKIGKKLEKLGQKIKDFFHK...
A0A7J8HNI9_ROUAE/129-155             ...GNLIRRGGRKIGEGIEGLGRRIKGLFS-...
A0A2K5ZF24_MANLE/139-166             ...GNFFRKVKEKIGGGLKKVGQKIKDFLGN...
A0A455X2E0_9PROT/35-61               .gk--EIDKAVQKTGEKIEKAGEKIQD----avn
U3EI75_CALJA/139-166                 ...GDILQKAREKIEGGLKKLVQKIKDFFGK...
#=GC seq_cons                        ...tshl++utpKIGcKlc+IGQ+IKDFFpp...
//
DBGET integrated database retrieval system