GenomeNet

Database: Pfam
Entry: CAV_VP3
LinkDB: CAV_VP3
Original site: CAV_VP3 
#=GF ID   CAV_VP3
#=GF AC   PF04771.16
#=GF DE   Chicken anaemia virus VP-3 protein
#=GF AU   Kerrison ND;0000-0002-1471-953X
#=GF SE   Pfam-B_2147 (release 7.6)
#=GF GA   25.00 25.00;
#=GF TC   25.00 28.80;
#=GF NC   24.90 20.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 --cpu 4 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR006858;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This protein is found in the nucleus of infected cells and may
#=GF CC   act as a transcriptional regulator.  It induces apoptosis, and
#=GF CC   is also known as apoptin [SwissProt annotation for
#=GF CC   Swiss:P54094].
#=GF SQ   7
#=GS A0A089QCI5_9VIRU/17-121  AC A0A089QCI5.1
#=GS Q91N81_9VIRU/1-121       AC Q91N81.2
#=GS U5UAJ3_9VIRU/1-110       AC U5UAJ3.1
#=GS VP3_CAVC1/1-121          AC Q99152.1
#=GS A0A2U9N4H7_9VIRU/2-108   AC A0A2U9N4H7.1
#=GS F4ZDR1_9VIRU/7-124       AC F4ZDR1.1
#=GS F6IB05_9VIRU/8-124       AC F6IB05.1
A0A089QCI5_9VIRU/17-121             ......rqapeh-------TSGRPMETSEQVTNSSALGGTVSKEILIGIGSITITLSLPGSATVRVLTTRSAPVDLSEATGSKNALDLRMPAAKRR..-------------------------------------rilvdcsvkeneqnrklrylat.....................
Q91N81_9VIRU/1-121                  ............MNALQEDTPPGPSTVFRPPTSSRPLETPHCREIRIGIAGITITLSLCGCANARAPTLRSATADNSESTGFKNVPDLRTDQPKPP..SKKRSCDPSEYRVSELKESLITTTPSRPRTARRCIRL...........................................
U5UAJ3_9VIRU/1-110                  .......msent------------STGSSRATNSSPSVGTHCKEILIGLGSVTIALSLPGCATVRVLTTRSATADSGEDTGSRSALDLRTPAARQRtlEPRRICADCASLVPLQKENLITSTVV-----------krglr......................................
VP3_CAVC1/1-121                     ............MNALQEDTPPGPSTVFRPPTSSRPLETPHCREIRIGIAGITITLSLCGCANARAPTLRSATADNSESTGFKNVPDLRTDQPKPP..SKKRSCDPSEYRVSELKESLITTTPSRPRTAKRRIRL...........................................
A0A2U9N4H7_9VIRU/2-108              .........est-----------------PLTSSAMSAGTNCKILLIGIGQTTIELSLPGYATVKLLTVRSVPVPHSETTGTRQMPHLLQ------..-------------------------------------ihqhrqtwtplqsseqenvpdvrsspgrgvrrprgtarksirl
F4ZDR1_9VIRU/7-124                  rrqatttrsell-------------TAYEHPTSSCPPAETTSIEIQIGIGSTIITLSLPGYASVRVLTTRSAPADDGGVTGSRRLADSSHRRPRRT..SSPEIYVGFSAKERRQKENLITLREEGPPI-------kklrl......................................
F6IB05_9VIRU/8-124                  .rratttqsell-------------TAYEHPTSSSPPAETTSIEIQIGIGSTIITLSLPGYASVRVLTTRSAPADDGGVTGSRRLVDLSHRRPRRT..SSPEIYVGFAAKEKQQKENLITLRENGPPIKK-----lrl........................................
#=GC seq_cons                       ...........h.............Ts.c.sTSSsP.ssTps+EIhIGIGuhTITLSLPGhAoVRlLTsRSAsADsuEsTGo+phsDLpp.ts+....p..c.hss.t.h....KEsLIT.p.............hh.........................................
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