GenomeNet

Database: Pfam
Entry: CBM_15
LinkDB: CBM_15
Original site: CBM_15 
#=GF ID   CBM_15
#=GF AC   PF03426.18
#=GF DE   Carbohydrate binding domain (family 15)
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   CAZY
#=GF GA   22.00 22.00;
#=GF TC   22.00 27.80;
#=GF NC   21.90 21.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Carbohydrate-binding_module
#=GF CL   CL0202
#=GF DR   INTERPRO; IPR005088;
#=GF DR   CAZY; CBM15;
#=GF DR   SCOP; 1gny; fa;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF SQ   10
#=GS A0A1Y6BRS6_9ALTE/209-343  AC A0A1Y6BRS6.1
#=GS A0A4Q5VG01_9GAMM/85-248   AC A0A4Q5VG01.1
#=GS A0A1I7M7K5_9BURK/64-201   AC A0A1I7M7K5.1
#=GS A0A1U9NBK8_9GAMM/97-258   AC A0A1U9NBK8.1
#=GS A0A1Y6BRS6_9ALTE/353-491  AC A0A1Y6BRS6.1
#=GS A0A2T6FFK8_9GAMM/107-265  AC A0A2T6FFK8.1
#=GS B3PDA8_CELJU/95-253       AC B3PDA8.1
#=GS A0A1U9NAY6_9GAMM/252-406  AC A0A1U9NAY6.1
#=GS A0A559QRD1_9ALTE/158-301  AC A0A559QRD1.1
#=GS A0A3N1P2E7_9GAMM/256-400  AC A0A3N1P2E7.1
A0A1Y6BRS6_9ALTE/209-343             .................edglpgws------SDWRTNTLTYDADRGVVVEPDW----A.NDDQI-AMYILD.APMNFNGVTLNYVVDITQEFKDA.GINLQPYVQ...QNSGSYDADWSGWVNN.SDLSVGVNVlTYTPSAA------------.-.--.-----.--.-.----------------------------------pedtqrvgiqvkgagrstdpstfmsimr
A0A4Q5VG01_9GAMM/85-248              ........................i-VADMSSGWRGNGTG---NTGVTYTIDGVVFDA.LADNIGAVFDVP.KGTVLEKAVIELIVNASSDFKTS.GGNLQPFAQ...ALDE-SAAEWGCWAPN.GTIGNATDT.TLTCKILEE-GRLNQSVAD.T.KV.GVQVKpGAnPlAGTITIKSAKITLAPASSSSSSYSSYNANVAS--lk..........................
A0A1I7M7K5_9BURK/64-201              .......alnagpnswtvnsdatdi-----------------------SSASNMKFTL.NQAGAVAGYNFA.NPINWSGATLNVVLNFDQAFVSDrNGGMDGILQfftYSDGWGTSEFNCWTGY.KVLVAGQDT.DFTCS------AFNV-QNA.V.GL.GIQFF.-A.G.TGSVTVKRATLKLAQ-------------------............................
A0A1U9NBK8_9GAMM/97-258              .........................LTLDMSSGWRGNGAN---NSGITYNSDGVAFAP.TGDAIGAVTDVF.KPIQLENAIIEMVVNVSSEYKTS.AANLQIFAQ...IKDGEWDGEWNCWSGN.EQLIANTDV.TINCTISEA-GKFNQTEND.V.QV.GVQAK.GT.P.AGTVTIKSVTITLPQASSSSSAQSSSTGSVYSAN............................
A0A1Y6BRS6_9ALTE/353-491             ...........dipldsgwsvsdgl--------------------EVDYNDGGVSYSP.TEADHQLTYRYD.GPQNFDGAVFGFTIVPDQAFIDS.GAPIQPFAQ...LD--SGAGAWSCWINGgTNLTL-DGI.TYDCTIG-GDGGFNFDASDsM.RV.GIQVK.DS.P.AGTLTISNVSITAA--------------------e...........................
A0A2T6FFK8_9GAMM/107-265             ........................i-ILDMTTGWRGNGTG---NSGVNVNNGGVSFNA.SAANIGAVTDLL.KPIQLEDAVIQMVVNVSPEFKDS.TATLQIFAQ...LKGDWAKGEWNCSTPN.SALTANTDV.TLTCTIDEPDDIFNQSTRD.V.QI.GIQGQ.GT.P.TGVVTIKSAQVTLKPSASS----SSSTGSVYSAN............................
B3PDA8_CELJU/95-253                  .........................IEVDMANGWRGNASGSTSHSGITYSADGVTFAA.LGDGVGAVFDIA.RPTTLEDAVIAMVVNVSAEFKAS.EANLQIFAQ...LKEDWSKGEWDCLAAS.SELTADTDL.TLTCTIDEDDDKFNQTARD.V.QV.GIQAK.GT.P.AGTITIKSVTITLAQEAYSAN-------------vdhlrd......................
A0A1U9NAY6_9GAMM/252-406             ............tvmdatpavtvqr------------------------DDTGVYFEP.TAGDQKLVYLLE.GPVDLVGRSFDMTFTVDQAFKDS.GADVQPIIQ...LNFGSYTGEFGCYVGN.GSLTPGVPQ.SINCATD-NDAFVAEEGQN.I.RV.GLQVK.NQ.P.AGRLTINSMQINIVSSS-----------------dtgpfaiipsqasvdsga..........
A0A559QRD1_9ALTE/158-301             .......................qs--VDLTANWNNDYQT---QPVISYDANGVVVSHdWSSGNGKAQAILpSTVDFEGAQLEMVINVDPEYDGE.ALALQLYVQ...QNSGSYSGAYAGWTMG.--IT-SGDY.TLSHTFTGTPADIGRVGVE.LiDIdGSLAT.GG.L.TAPFTIKSVTIT----------------------yp..........................
A0A3N1P2E7_9GAMM/256-400             pgevtvqrdgeggvyyeptaadqkl---------------------------------.-------VYLLE.GPVDLVGRSFDMTFTVDQAFKDS.GADVQPIIQ...QNFGSYTGEFGCYVGN.GSLTAGEPY.EVTCA-TENEAFVAEEGQN.I.RV.GLQVK.NE.V.AGRVTINSMQINIVSSS-----------------gdsgpftitptq................
#=GC seq_cons                        ........................h......ssWpssh.s...p.slshsssGVsFss.susshsAVaslt.sPlsL-GAslsMVlNVsp-FKsS.uAsLQsasQ...hssGphsGEWuCWssN.usLTsusDh.TlTCohsts.uthNpssp-.l.pV.GlQsK.ss.P.AGslTIKSspITls.tu.............................................
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